WormBase Tree Display for Gene: WBGene00003808
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| WBGene00003808 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | npr-2 | Person_evidence | WBPerson42 | |||||
| Sequence_name | T05A1.1 | ||||||||
| Molecular_name | T05A1.1a | ||||||||
| T05A1.1a.1 | |||||||||
| CE32924 | |||||||||
| T05A1.1b | |||||||||
| CE32925 | |||||||||
| T05A1.1c | |||||||||
| CE49905 | |||||||||
| T05A1.1b.1 | |||||||||
| T05A1.1b.2 | |||||||||
| T05A1.1c.1 | |||||||||
| Other_name | CELE_T05A1.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | npr-2 | ||||||||
| DB_info | Database | AceView | gene | 4K334 | |||||
| WormQTL | gene | WBGene00003808 | |||||||
| WormFlux | gene | WBGene00003808 | |||||||
| NDB | locus_tag | CELE_T05A1.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003808|UniProtKB=G5ED22 | |||||||
| family | PTHR24235 | ||||||||
| NCBI | gene | 177790 | |||||||
| RefSeq | protein | NM_069300.6 | |||||||
| NM_001380412.1 | |||||||||
| NM_001372906.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF350004 | |||||||
| TrEMBL | UniProtAcc | A0A061AKJ8 | |||||||
| Q22188 | |||||||||
| G5ED22 | |||||||||
| UniProt_GCRP | UniProtAcc | G5ED22 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npr | ||||||||
| Allele (118) | |||||||||
| Strain | WBStrain00040621 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (19) | |||||||||
| Structured_description | Automated_description | Predicted to enable neuropeptide binding activity and neuropeptide receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in neuron projection and plasma membrane. Expressed in head neurons and interneuron. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05A1.1a | |||||||
| T05A1.1b | |||||||||
| T05A1.1c | |||||||||
| Corresponding_CDS_history | T05A1.1:wp92 | ||||||||
| Corresponding_transcript | T05A1.1a.1 | ||||||||
| T05A1.1b.1 | |||||||||
| T05A1.1b.2 | |||||||||
| T05A1.1c.1 | |||||||||
| Other_sequence | ACC04545_1 | ||||||||
| OOC02671_1 | |||||||||
| Dviv_isotig19619 | |||||||||
| EX827971.1 | |||||||||
| Oden_isotig20635 | |||||||||
| Dviv_isotig19620 | |||||||||
| Acan_isotig10695 | |||||||||
| MI02463 | |||||||||
| Associated_feature | WBsf230588 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00052424 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018164 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035156 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075428 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072223 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12242 | ||||||||
| Expr1020820 | |||||||||
| Expr1156048 | |||||||||
| Expr2014416 | |||||||||
| Expr2032657 | |||||||||
| Drives_construct | WBCnstr00035855 | ||||||||
| Construct_product | WBCnstr00035855 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Map | IV | Position | 4.31829 | Error | 0.001686 | |||
| Positive | Positive_clone | T05A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5101 | |||||||
| Pseudo_map_position | |||||||||
| Reference (18) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
