WormBase Tree Display for Gene: WBGene00003728
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WBGene00003728 | SMap | S_parent | Sequence | C28D4 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nhr | ||||||
Allele (34) | |||||||
Strain | WBStrain00036714 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00088597 | ||||||
00088598 | |||||||
00088599 | |||||||
00088600 | |||||||
00111709 | |||||||
00111710 | |||||||
00111711 | |||||||
00111712 | |||||||
Contained_in_operon | CEOP4336 | ||||||
Ortholog (33) | |||||||
Paralog (217) | |||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C28D4.9 | |||||
Corresponding_CDS_history | C28D4.9:wp92 | ||||||
C28D4.9:wp109 | |||||||
C28D4.9a:wp264 | |||||||
C28D4.9b:wp264 | |||||||
Corresponding_transcript | C28D4.9.1 | ||||||
Other_sequence | CJC07132_1 | ||||||
Associated_feature | WBsf646249 | ||||||
WBsf659800 | |||||||
WBsf716577 | |||||||
WBsf717174 | |||||||
WBsf718161 | |||||||
WBsf997466 | |||||||
WBsf1017992 | |||||||
WBsf228862 | |||||||
WBsf228863 | |||||||
WBsf228864 | |||||||
Transcription_factor | WBTranscriptionFactor000367 | ||||||
Experimental_info | RNAi_result | WBRNAi00041414 | Inferred_automatically | RNAi_primary | |||
WBRNAi00011297 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076172 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1025967 | ||||||
Expr1031740 | |||||||
Expr1145445 | |||||||
Expr2014038 | |||||||
Expr2032278 | |||||||
Drives_construct | WBCnstr00035913 | ||||||
Construct_product | WBCnstr00035913 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (81) | |||||||
Interaction | WBInteraction000526754 | ||||||
WBInteraction000526817 | |||||||
WBInteraction000526818 | |||||||
WBInteraction000526819 | |||||||
WBInteraction000530574 | |||||||
WBInteraction000543711 | |||||||
Map_info | Map | IV | Position | 4.38835 | Error | 0.000496 | |
Positive | Positive_clone | C28D4 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference (2) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |