WormBase Tree Display for Gene: WBGene00003719
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| WBGene00003719 | SMap | S_parent | Sequence | C50B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-129 | Person_evidence | WBPerson600 | |||||
| Sequence_name | C50B6.14 | ||||||||
| Molecular_name | C50B6.14 | ||||||||
| C50B6.14.1 | |||||||||
| CE40924 | |||||||||
| Other_name | CELE_C50B6.14 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-129 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00003719 | |||||
| WormFlux | gene | WBGene00003719 | |||||||
| NDB | locus_tag | CELE_C50B6.14 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003719|UniProtKB=A5JYV4 | |||||||
| family | PTHR24083 | ||||||||
| NCBI | gene | 183635 | |||||||
| RefSeq | protein | NM_001129415.5 | |||||||
| TrEMBL | UniProtAcc | A5JYV4 | |||||||
| UniProt_GCRP | UniProtAcc | A5JYV4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00036387 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Contained_in_operon | CEOP5385 | ||||||||
| Ortholog (37) | |||||||||
| Paralog (42) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C50B6.14 | |||||||
| Corresponding_CDS_history | C50B6.14:wp175 | ||||||||
| C50B6.14a:wp261 | |||||||||
| Corresponding_transcript | C50B6.14.1 | ||||||||
| Associated_feature | WBsf978884 | ||||||||
| WBsf234794 | |||||||||
| Gene_product_binds (376) | |||||||||
| Transcription_factor | WBTranscriptionFactor000468 | ||||||||
| Experimental_info | Expr_pattern | Expr1013317 | |||||||
| Expr1146828 | |||||||||
| Expr1200111 | |||||||||
| Expr2014028 | |||||||||
| Expr2032268 | |||||||||
| Drives_construct | WBCnstr00035921 | ||||||||
| Construct_product | WBCnstr00016744 | ||||||||
| WBCnstr00016746 | |||||||||
| WBCnstr00035921 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (77) | |||||||||
| Map_info | Map | V | Position | 5.1495 | Error | 0.003068 | |||
| Positive | Positive_clone | C50B6 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00033379 | |||||||||
| WBPaper00034489 | |||||||||
| WBPaper00064415 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
