WormBase Tree Display for Gene: WBGene00003718
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| WBGene00003718 | SMap | S_parent | Sequence | F44C8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-128 | Person_evidence | WBPerson600 | |||||
| Sequence_name | F44C8.5 | ||||||||
| Molecular_name | F44C8.5b | ||||||||
| F44C8.5a | |||||||||
| CE50078 | |||||||||
| F44C8.5b.1 | |||||||||
| F44C8.5b.2 | |||||||||
| Other_name | CELE_F44C8.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-128 | ||||||||
| DB_info | Database | AceView | gene | 5C703 | |||||
| WormQTL | gene | WBGene00003718 | |||||||
| WormFlux | gene | WBGene00003718 | |||||||
| NDB | locus_tag | CELE_F44C8.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003718|UniProtKB=H2L017 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 178700 | |||||||
| RefSeq | protein | NR_131679.2 | |||||||
| NM_001028752.6 | |||||||||
| TrEMBL | UniProtAcc | H2L017 | |||||||
| UniProt_GCRP | UniProtAcc | H2L017 | |||||||
| RNAcentral | URSid | URS00008DB713 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (84) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022752 | ||||||||
| 00022753 | |||||||||
| 00022754 | |||||||||
| 00022755 | |||||||||
| 00111669 | |||||||||
| 00111670 | |||||||||
| 00111671 | |||||||||
| 00111672 | |||||||||
| Contained_in_operon | CEOP5028 | ||||||||
| Ortholog (36) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F44C8.5b | |||||||
| Corresponding_CDS_history | F44C8.5:wp92 | ||||||||
| F44C8.5:wp101 | |||||||||
| F44C8.5a:wp244 | |||||||||
| F44C8.5b:wp244 | |||||||||
| Corresponding_transcript | F44C8.5a | ||||||||
| F44C8.5b.1 | |||||||||
| F44C8.5b.2 | |||||||||
| Corresponding_transcript_history | F44C8.5a:wp250 | ||||||||
| F44C8.5c:wp250 | |||||||||
| Associated_feature | WBsf999474 | ||||||||
| WBsf999475 | |||||||||
| Transcription_factor | WBTranscriptionFactor000674 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00092928 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014919 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032229 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025887 | ||||||||
| Expr1031732 | |||||||||
| Expr1151123 | |||||||||
| Expr2014027 | |||||||||
| Expr2032267 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (82) | |||||||||
| Interaction | WBInteraction000553811 | ||||||||
| Map_info | Map | V | Position | -15.2906 | Error | 0.010549 | |||
| Positive | Positive_clone | F44C8 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00065841 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
