WormBase Tree Display for Gene: WBGene00003716

WBGene00003716 SMap: S_parent: Sequence: F44C8
  Identity: Version: 1
    Name: CGC_name: nhr-126 Person_evidence: WBPerson600
      Sequence_name: F44C8.10
      Molecular_name: F44C8.10
        F44C8.10.1
        CE30795
      Other_name: F44C8.f Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_F44C8.10 Accession_evidence: NDB BX284605
      Public_name: nhr-126
    DB_info: Database: AceView gene 5C709
        WormQTL gene WBGene00003716
        WormFlux gene WBGene00003716
        NDB locus_tag CELE_F44C8.10
        Panther gene CAEEL|WormBase=WBGene00003716|UniProtKB=G5EFN9
          family PTHR45680
        NCBI gene 185731
        RefSeq protein NM_071208.6
        TrEMBL UniProtAcc G5EFN9
        UniProt_GCRP UniProtAcc G5EFN9
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele (39)
    Strain: WBStrain00036347
      WBStrain00036620
    RNASeq_FPKM (74)
    GO_annotation: 00018475
      00018476
      00018477
      00018478
      00111661
      00111662
      00111663
      00111664
    Contained_in_operon: CEOP5028
    Ortholog (36)
    Paralog (217)
    Structured_description: Concise_description: nhr-126 encodes a member of the nuclear hormone receptor family. Curator_confirmed: WBPerson48
          Date_last_updated: 16 Feb 2005 00:00:00
      Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F44C8.10
    Corresponding_transcript: F44C8.10.1
    Associated_feature: WBsf978633
      WBsf999479
      WBsf231487
      WBsf231488
    Transcription_factor: WBTranscriptionFactor000604
  Experimental_info: RNAi_result: WBRNAi00047261 Inferred_automatically: RNAi_primary
      WBRNAi00047262 Inferred_automatically: RNAi_primary
      WBRNAi00014914 Inferred_automatically: RNAi_primary
      WBRNAi00076424 Inferred_automatically: RNAi_primary
      WBRNAi00032224 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015732
      Expr1031730
      Expr1151118
      Expr2014025
      Expr2032265
    Drives_construct: WBCnstr00035923
    Construct_product: WBCnstr00035923
    Microarray_results (19)
    Expression_cluster (91)
    SAGE_tag: SAGE:ccctcctgctccaatag Strand: Sense
        Unambiguously_mapped
      SAGE:ggtcgcttggactcgtc Strand: Sense
        Unambiguously_mapped
      SAGE:gaagttgctg Strand: Sense
        Unambiguously_mapped
      SAGE:aagtttttac Strand: Antisense
      SAGE:ctcgacaact Strand: Antisense
      SAGE:atttggactt Strand: Sense
        Unambiguously_mapped
      SAGE:ccgggagtaa Strand: Sense
        Unambiguously_mapped
      SAGE:caaaaaacct Strand: Sense
        Unambiguously_mapped
      SAGE:atttggacttttttgca Strand: Sense
        Unambiguously_mapped
    Interaction: WBInteraction000288862
      WBInteraction000324264
  Map_info: Map: V Position: -15.2276 Error: 0.008698
    Positive: Positive_clone: F44C8 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027309
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene