WormBase Tree Display for Gene: WBGene00003711
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| WBGene00003711 | SMap | S_parent | Sequence | E02H9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-121 | Person_evidence | WBPerson600 | |||||
| Sequence_name | E02H9.8 | ||||||||
| Molecular_name | E02H9.8a | ||||||||
| E02H9.8a.1 | |||||||||
| CE30644 | |||||||||
| E02H9.8b | |||||||||
| CE41629 | |||||||||
| E02H9.8b.1 | |||||||||
| Other_name | CELE_E02H9.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | nhr-121 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00003711 | |||||
| WormFlux | gene | WBGene00003711 | |||||||
| NDB | locus_tag | CELE_E02H9.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003711|UniProtKB=Q9TZ99 | |||||||
| family | PTHR46011 | ||||||||
| NCBI | gene | 184003 | |||||||
| RefSeq | protein | NM_065158.7 | |||||||
| NM_001129219.6 | |||||||||
| SwissProt | UniProtAcc | Q9TZ99 | |||||||
| TREEFAM | TREEFAM_ID | TF321941 | |||||||
| TrEMBL | UniProtAcc | A8WJ04 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TZ99 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (157) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00005428 | ||||||||
| 00005429 | |||||||||
| 00005430 | |||||||||
| 00005431 | |||||||||
| 00097900 | |||||||||
| 00111641 | |||||||||
| 00111642 | |||||||||
| 00111643 | |||||||||
| 00111644 | |||||||||
| Ortholog (31) | |||||||||
| Paralog (216) | |||||||||
| Structured_description | Automated_description | Enables steroid hormone binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | E02H9.8a | |||||||
| E02H9.8b | |||||||||
| Corresponding_CDS_history | E02H9.8:wp183 | ||||||||
| Corresponding_transcript | E02H9.8a.1 | ||||||||
| E02H9.8b.1 | |||||||||
| Other_sequence | Oden_isotig08138 | ||||||||
| Tcol_isotig21033 | |||||||||
| Oden_isotig12979 | |||||||||
| Name_isotig09484 | |||||||||
| Acan_isotig06947 | |||||||||
| HG08436 | |||||||||
| Oden_isotig12980 | |||||||||
| Acan_isotig06946 | |||||||||
| Oden_isotig12978 | |||||||||
| Associated_feature | WBsf650878 | ||||||||
| WBsf226276 | |||||||||
| WBsf226277 | |||||||||
| WBsf226278 | |||||||||
| Transcription_factor | WBTranscriptionFactor000387 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00030476 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043618 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006582 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012656 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018219 | ||||||||
| Expr1147610 | |||||||||
| Expr2014020 | |||||||||
| Expr2032260 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (109) | |||||||||
| Interaction | WBInteraction000148779 | ||||||||
| WBInteraction000369728 | |||||||||
| WBInteraction000428308 | |||||||||
| WBInteraction000444546 | |||||||||
| WBInteraction000526955 | |||||||||
| WBInteraction000544697 | |||||||||
| Map_info | Map | III | Position | -14.4194 | Error | 0.367759 | |||
| Positive | Positive_clone | E02H9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5258 | |||||||
| 4597 | |||||||||
| 4812 | |||||||||
| 4846 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00031144 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
