WormBase Tree Display for Gene: WBGene00003706

WBGene00003706 SMap: S_parent: Sequence: F09C6
  Identity: Version: 1
    Name: CGC_name: nhr-116 Person_evidence: WBPerson600
      Sequence_name: F09C6.9
      Molecular_name: F09C6.9
        F09C6.9.1
        CE37501
      Other_name: CELE_F09C6.9 Accession_evidence: NDB BX284605
      Public_name: nhr-116
    DB_info: Database: AceView gene 5R395
        WormQTL gene WBGene00003706
        WormFlux gene WBGene00003706
        NDB locus_tag CELE_F09C6.9
        Panther gene CAEEL|WormBase=WBGene00003706|UniProtKB=G5EE21
          family PTHR24083
        NCBI gene 180129
        RefSeq protein NM_074872.7
        TREEFAM TREEFAM_ID TF321099
        TrEMBL UniProtAcc G5EE21
        UniProt_GCRP UniProtAcc G5EE21
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele (229)
    Strain: WBStrain00036698
      WBStrain00036715
    RNASeq_FPKM (74)
    GO_annotation (13)
    Ortholog (31)
    Paralog (42)
    Structured_description: Automated_description: Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F09C6.9
    Corresponding_CDS_history: F09C6.9:wp132
    Corresponding_transcript: F09C6.9.1
    Other_sequence: BMC03890_1
      BMC00024_2
    Associated_feature: WBsf662172
      WBsf978722
      WBsf1002557
      WBsf1021203
    Transcription_factor: WBTranscriptionFactor000637
  Experimental_info: RNAi_result: WBRNAi00092002 Inferred_automatically: RNAi_primary
      WBRNAi00044095 Inferred_automatically: RNAi_primary
      WBRNAi00012958 Inferred_automatically: RNAi_primary
      WBRNAi00012966 Inferred_automatically: RNAi_primary
      WBRNAi00112584 Inferred_automatically: RNAi_primary
      WBRNAi00044106 Inferred_automatically: RNAi_primary
      WBRNAi00065583 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019057
      Expr1031726
      Expr1148074
      Expr1200075
      Expr2014014
      Expr2032254
    Drives_construct: WBCnstr00035929
    Construct_product: WBCnstr00016718
      WBCnstr00035929
    Microarray_results (19)
    Expression_cluster (108)
    Interaction (13)
  Map_info: Map: V Position: 11.3441 Error: 0.001701
    Positive: Positive_clone: F09C6 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00028802
    WBPaper00033379
    WBPaper00034489
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene