WormBase Tree Display for Gene: WBGene00003671
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| WBGene00003671 | Evidence | Paper_evidence | WBPaper00003754 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C47F8 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-81 | Person_evidence | WBPerson573 | |||||
| Sequence_name | C47F8.8 | ||||||||
| Molecular_name | C47F8.8 | ||||||||
| C47F8.8.1 | |||||||||
| CE34166 | |||||||||
| Other_name | CELE_C47F8.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | nhr-81 | ||||||||
| DB_info | Database | AceView | gene | 1M906 | |||||
| WormQTL | gene | WBGene00003671 | |||||||
| WormFlux | gene | WBGene00003671 | |||||||
| NDB | locus_tag | CELE_C47F8.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003671|UniProtKB=O62116 | |||||||
| family | PTHR46397 | ||||||||
| NCBI | gene | 191728 | |||||||
| RefSeq | protein | NM_060717.5 | |||||||
| TREEFAM | TREEFAM_ID | TF321941 | |||||||
| TrEMBL | UniProtAcc | O62116 | |||||||
| UniProt_GCRP | UniProtAcc | O62116 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Laboratory | PY | ||||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00037032 | ||||||||
| 00037033 | |||||||||
| 00037034 | |||||||||
| 00111485 | |||||||||
| 00111486 | |||||||||
| 00111487 | |||||||||
| 00111488 | |||||||||
| Ortholog (19) | |||||||||
| Paralog (225) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in seam cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C47F8.8 | |||||||
| Corresponding_CDS_history | C47F8.8:wp101 | ||||||||
| Corresponding_transcript | C47F8.8.1 | ||||||||
| Associated_feature | WBsf985544 | ||||||||
| Transcription_factor | WBTranscriptionFactor000654 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00029924 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003185 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113953 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042699 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1176 | ||||||||
| Expr1015120 | |||||||||
| Expr1146690 | |||||||||
| Expr2014233 | |||||||||
| Expr2032474 | |||||||||
| Drives_construct | WBCnstr00010127 | ||||||||
| WBCnstr00018398 | |||||||||
| WBCnstr00035957 | |||||||||
| Construct_product | WBCnstr00010127 | ||||||||
| WBCnstr00035957 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (40) | |||||||||
| Interaction | WBInteraction000527452 | ||||||||
| WBInteraction000585337 | |||||||||
| Map_info | Map | I | Position | 13.1224 | Error | 0.003525 | |||
| Positive | Positive_clone | C47F8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5363 | |||||||
| 5408 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004964 | ||||||||
| WBPaper00027309 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
