WormBase Tree Display for Gene: WBGene00003648
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| WBGene00003648 | Evidence | Paper_evidence | WBPaper00003416 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R11G11 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-58 | Person_evidence | WBPerson600 | |||||
| Sequence_name | R11G11.2 | ||||||||
| Molecular_name | R11G11.2 | ||||||||
| R11G11.2.1 | |||||||||
| CE12742 | |||||||||
| Other_name | CELE_R11G11.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-58 | ||||||||
| DB_info | Database | AceView | gene | 5B11 | |||||
| WormQTL | gene | WBGene00003648 | |||||||
| WormFlux | gene | WBGene00003648 | |||||||
| NDB | locus_tag | CELE_R11G11.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003648|UniProtKB=O16960 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 178573 | |||||||
| RefSeq | protein | NM_070835.6 | |||||||
| TrEMBL | UniProtAcc | O16960 | |||||||
| UniProt_GCRP | UniProtAcc | O16960 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (150) | |||||||||
| Strain | WBStrain00035286 | ||||||||
| WBStrain00035287 | |||||||||
| WBStrain00035288 | |||||||||
| WBStrain00037662 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029033 | ||||||||
| 00029034 | |||||||||
| 00029035 | |||||||||
| 00111398 | |||||||||
| 00111399 | |||||||||
| 00111400 | |||||||||
| 00111401 | |||||||||
| Ortholog (21) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in excretory cell; excretory duct; excretory gland cell; and vulva. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R11G11.2 | |||||||
| Corresponding_CDS_history | R11G11.2b:wp248 | ||||||||
| Corresponding_transcript | R11G11.2.1 | ||||||||
| Associated_feature | WBsf646637 | ||||||||
| WBsf646638 | |||||||||
| WBsf661101 | |||||||||
| WBsf981881 | |||||||||
| WBsf999178 | |||||||||
| WBsf1019084 | |||||||||
| WBsf231346 | |||||||||
| Transcription_factor | WBTranscriptionFactor000722 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00034870 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051812 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017771 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007383 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram66 | ||||||||
| Chronogram148 | |||||||||
| Chronogram330 | |||||||||
| Expr7639 | |||||||||
| Expr1023369 | |||||||||
| Expr1031690 | |||||||||
| Expr1155473 | |||||||||
| Expr2014208 | |||||||||
| Expr2032449 | |||||||||
| Drives_construct | WBCnstr00001096 | ||||||||
| WBCnstr00001097 | |||||||||
| WBCnstr00001098 | |||||||||
| WBCnstr00012784 | |||||||||
| WBCnstr00035972 | |||||||||
| Construct_product | WBCnstr00035972 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (163) | |||||||||
| Interaction | WBInteraction000533355 | ||||||||
| Map_info | Map | V | Position | -19.9805 | |||||
| Positive | Positive_clone | R11G11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
