WormBase Tree Display for Gene: WBGene00003549
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WBGene00003549 | Evidence | Author_evidence | Moehrlen F | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F58B4 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nas | ||||||
Allele (44) | |||||||
Strain | WBStrain00002648 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (13) | |||||||
Ortholog (26) | |||||||
Paralog (48) | |||||||
Structured_description | Concise_description | nas-31 encodes an astacin family zinc metalloprotease with a single SXC/ShK toxin domain in addition to the EGF and CUB domains; nas-31 is expressed in the anal depressor, intestinal, and vulval muscles and head neurons. | Paper_evidence | WBPaper00035910 | |||
Curator_confirmed | WBPerson324 | ||||||
Date_last_updated | 25 Oct 2010 00:00:00 | ||||||
Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in molting cycle and proteolysis. Predicted to be located in extracellular region. Expressed in AMshL; AMshR; PHshL; PHshR; and head. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F58B4.1a | |||||
F58B4.1b | |||||||
Corresponding_CDS_history | F58B4.1:wp111 | ||||||
Corresponding_transcript | F58B4.1a.1 | ||||||
F58B4.1b.1 | |||||||
Other_sequence (148) | |||||||
Associated_feature | WBsf653045 | ||||||
WBsf669345 | |||||||
WBsf234467 | |||||||
WBsf234468 | |||||||
Experimental_info | RNAi_result | WBRNAi00048956 | Inferred_automatically | RNAi_primary | |||
WBRNAi00015945 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033077 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089094 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr6250 | ||||||
Expr8927 | |||||||
Expr1025804 | |||||||
Expr1152693 | |||||||
Expr2013879 | |||||||
Expr2032119 | |||||||
Drives_construct | WBCnstr00003194 | ||||||
WBCnstr00013622 | |||||||
WBCnstr00036052 | |||||||
Construct_product | WBCnstr00013622 | ||||||
WBCnstr00036052 | |||||||
Microarray_results (25) | |||||||
Expression_cluster (126) | |||||||
Interaction (66) | |||||||
Map_info | Map | V | Position | 2.83133 | Error | 0.000716 | |
Positive | Positive_clone | F58B4 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00006254 | ||||||
WBPaper00026805 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |