WormBase Tree Display for Gene: WBGene00003387
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| WBGene00003387 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y54E10BR | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mod-5 | Person_evidence | WBPerson268 | |||||
| Sequence_name | Y54E10BR.7 | ||||||||
| Molecular_name | Y54E10BR.7 | ||||||||
| Y54E10BR.7.1 | |||||||||
| CE28995 | |||||||||
| Other_name | Y54E10BR.b | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y54E10BR.7 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | mod-5 | ||||||||
| DB_info | Database | AceView | gene | 1D604 | |||||
| WormQTL | gene | WBGene00003387 | |||||||
| WormFlux | gene | WBGene00003387 | |||||||
| NDB | locus_tag | CELE_Y54E10BR.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003387|UniProtKB=Q9N3C7 | |||||||
| family | PTHR11616 | ||||||||
| NCBI | gene | 171879 | |||||||
| RefSeq | protein | NM_058694.4 | |||||||
| TrEMBL | UniProtAcc | Q9N3C7 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3C7 | |||||||
| OMIM | gene | 182138 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info (10) | |||||||||
| Disease_info | Experimental_model | DOID:809 | Homo sapiens | Paper_evidence | WBPaper00034643 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 28 May 2019 00:00:00 | ||||||||
| Potential_model (23) | |||||||||
| Models_disease_asserted | WBDOannot00000682 | ||||||||
| Molecular_info | Corresponding_CDS | Y54E10BR.7 | |||||||
| Corresponding_transcript | Y54E10BR.7.1 | ||||||||
| Other_sequence (7) | |||||||||
| Associated_feature | WBsf664007 | ||||||||
| WBsf717471 | |||||||||
| WBsf983050 | |||||||||
| WBsf983051 | |||||||||
| WBsf983052 | |||||||||
| WBsf1009445 | |||||||||
| WBsf1009446 | |||||||||
| WBsf219092 | |||||||||
| WBsf219093 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057365 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00113742 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113746 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004736 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9349 | ||||||||
| Expr9350 | |||||||||
| Expr9351 | |||||||||
| Expr1029124 | |||||||||
| Expr1160802 | |||||||||
| Expr2013646 | |||||||||
| Expr2031880 | |||||||||
| Drives_construct | WBCnstr00013917 | ||||||||
| WBCnstr00013918 | |||||||||
| Antibody | WBAntibody00002265 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction | WBInteraction000001398 | ||||||||
| WBInteraction000001399 | |||||||||
| WBInteraction000029562 | |||||||||
| WBInteraction000031265 | |||||||||
| WBInteraction000162267 | |||||||||
| WBInteraction000162559 | |||||||||
| WBInteraction000165837 | |||||||||
| WBInteraction000166111 | |||||||||
| WBInteraction000426665 | |||||||||
| WBInteraction000471671 | |||||||||
| Map_info | Map | I | Position | -4.51354 | Error | 0.034726 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | Y54E10A_154 | |||||||
| Y54E10BR | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Mapping_data | Multi_point | 3833 | |||||||
| 3831 | |||||||||
| 3834 | |||||||||
| 3835 | |||||||||
| 3873 | |||||||||
| 3832 | |||||||||
| Reference (79) | |||||||||
| Remark | mod-5 was once called dmo-5. Y54E10BR.7 is the real CGC-approved mod-5, and all the Ranganathan genetic mapping data belong to it, as mod-5, reference allele n822. The gene dmo-5 (reference allele t1502, cgc3363) is something different, but was originally incorrectly published. The allele t1502 is therefore, deleted from mod-5 | CGC_data_submission | |||||||
| Method | Gene |
