WormBase Tree Display for Gene: WBGene00003314
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WBGene00003314 | Evidence | Paper_evidence | WBPaper00004928 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y56A3A | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | mir-86 | Person_evidence | WBPerson18 | |||||
Sequence_name | Y56A3A.34 | ||||||||
Molecular_name | Y56A3A.34 | ||||||||
Y56A3A.34a | |||||||||
Y56A3A.34b | |||||||||
Other_name | cel-mir-86 | Remark | miRBase V21 import | ||||||
MirGeneDB 2.1 import | |||||||||
CELE_Y56A3A.34 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | mir-86 | ||||||||
DB_info | Database | miRBase | acc | MI0000057 | |||||
SignaLink | mirna | cel-mir-86 | |||||||
MirGeneDB | cel | Cel-Mir-86 | |||||||
NDB | locus_tag | CELE_Y56A3A.34 | |||||||
NCBI | gene | 176630 | |||||||
RefSeq | protein | NR_000190.2 | |||||||
RNAcentral | URSid | URS00004C0694 | |||||||
URS00004DC042 | |||||||||
URS000059F36E | |||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001265 | |||||||
Gene_class | mir | ||||||||
Allele | WBVar01499701 | ||||||||
WBVar00090881 | |||||||||
WBVar01500138 | |||||||||
WBVar01500139 | |||||||||
WBVar01499774 | |||||||||
WBVar00251657 | |||||||||
WBVar00180784 | |||||||||
WBVar00865752 | |||||||||
WBVar00865753 | |||||||||
Strain | WBStrain00027552 | ||||||||
In_cluster | MIR-86 | ||||||||
RNASeq_FPKM (74) | |||||||||
Structured_description | Concise_description | mir-86 encodes a microRNA, a small non-protein coding RNA and is conserved in the nematode C. briggsae; mir-86 is strongly expressed at all developmental stages in normal worms and in glp-4(bn2) mutant worms; many of the known microRNAs are involved in post-transcriptional regulation of genes; the precise function of miR-86 is unknown. | Paper_evidence | WBPaper00004927 | |||||
WBPaper00005825 | |||||||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 08 Feb 2005 00:00:00 | ||||||||
Automated_description | Expressed in dorsal nerve cord; nerve ring; tail neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_transcript | Y56A3A.34 | |||||||
Y56A3A.34a | |||||||||
Y56A3A.34b | |||||||||
Other_sequence | AJ487609 | ||||||||
Experimental_info | RNAi_result | WBRNAi00037553 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr2500 | ||||||||
Expr10942 | |||||||||
Expr12851 | |||||||||
Drives_construct | WBCnstr00022902 | ||||||||
Expression_cluster (29) | |||||||||
Map_info | Map | III | Position | 13.5261 | Error | 0.009897 | |||
Positive | Positive_clone | Y56A3A | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00004927 | ||||||||
WBPaper00005825 | |||||||||
WBPaper00031335 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |