WormBase Tree Display for Gene: WBGene00003304
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WBGene00003304 | Evidence | Paper_evidence | WBPaper00004928 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C44B11 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | mir-76 | Person_evidence | WBPerson18 | |||||
Sequence_name | C44B11.5 | ||||||||
Molecular_name | C44B11.5 | ||||||||
C44B11.5a | |||||||||
C44B11.5b | |||||||||
Other_name | cel-mir-76 | Remark | miRBase V21 import | ||||||
MirGeneDB 2.1 import | |||||||||
CELE_C44B11.5 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | mir-76 | ||||||||
DB_info | Database | miRBase | acc | MI0000047 | |||||
SignaLink | mirna | cel-mir-76 | |||||||
MirGeneDB | cel | Cel-Mir-76 | |||||||
NDB | locus_tag | CELE_C44B11.5 | |||||||
NCBI | gene | 260081 | |||||||
RefSeq | protein | NR_000276.2 | |||||||
RNAcentral | URSid | URS0000070703 | |||||||
URS000016F6D7 | |||||||||
URS0000448853 | |||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001265 | |||||||
Gene_class | mir | ||||||||
Allele (5) | |||||||||
Strain | WBStrain00027462 | ||||||||
In_cluster | MIR-76 | ||||||||
RNASeq_FPKM (74) | |||||||||
Structured_description | Concise_description | mir-76 encodes a microRNA, a small non-protein coding RNA and has a potential ortholog in C. briggsae; based on RNA sequence the mir-76 family consists of miR-76 and human miR-187; many of the known microRNAs are involved in post-transcriptional regulation of genes; the precise function of miR-76 is unknown. | Paper_evidence | WBPaper00004927 | |||||
WBPaper00005825 | |||||||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 08 Feb 2005 00:00:00 | ||||||||
Automated_description | Enriched in neurons based on RNA-seq studies. Is affected by several genes including prg-1; alg-1; and alg-2 based on RNA-seq studies. Is affected by nicotine based on quantitative PCR studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_transcript | C44B11.5 | |||||||
C44B11.5a | |||||||||
C44B11.5b | |||||||||
Associated_feature | WBsf979109 | ||||||||
Experimental_info | Expr_pattern | Expr2470 | |||||||
Expr8469 | |||||||||
Expr10938 | |||||||||
Drives_construct | WBCnstr00005511 | ||||||||
WBCnstr00016909 | |||||||||
Expression_cluster (17) | |||||||||
Interaction | WBInteraction000542162 | ||||||||
Map_info | Map | III | Position | -7.47311 | Error | 0.010113 | |||
Positive | Positive_clone | C44B11 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00004927 | ||||||||
WBPaper00005825 | |||||||||
WBPaper00031335 | |||||||||
WBPaper00032329 | |||||||||
WBPaper00032458 | |||||||||
WBPaper00057263 | |||||||||
WBPaper00061065 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |