WormBase Tree Display for Gene: WBGene00003263
expand all nodes | collapse all nodes | view schema
WBGene00003263 | Evidence | Paper_evidence | WBPaper00004928 | ||||||
---|---|---|---|---|---|---|---|---|---|
WBPaper00005879 | |||||||||
WBPaper00004927 | |||||||||
SMap | S_parent | Sequence | Y62F5A | ||||||
Identity | Version | 1 | |||||||
Name (5) | |||||||||
DB_info | Database | miRBase | acc | MI0000006 | |||||
SignaLink | mirna | cel-mir-35 | |||||||
MirGeneDB | cel | Cel-Mir-36-P1 | |||||||
NDB | locus_tag | CELE_Y62F5A.2 | |||||||
NCBI | gene | 260178 | |||||||
RefSeq | protein | NR_000921.2 | |||||||
RNAcentral | URSid | URS0000125CA0 | |||||||
URS0000165F41 | |||||||||
URS000055C853 | |||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001265 | |||||||
Gene_class | mir | ||||||||
Allele | WBVar01499702 | ||||||||
WBVar01498604 | |||||||||
WBVar01498613 | |||||||||
WBVar01498435 | |||||||||
WBVar00145669 | |||||||||
WBVar00323158 | |||||||||
WBVar01498941 | |||||||||
Strain | WBStrain00035835 | ||||||||
WBStrain00051758 | |||||||||
WBStrain00051755 | |||||||||
WBStrain00051757 | |||||||||
WBStrain00054865 | |||||||||
WBStrain00054866 | |||||||||
WBStrain00054864 | |||||||||
In_cluster | MIR-36 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00106234 | ||||||||
00106235 | |||||||||
Structured_description | Concise_description | mir-35 encodes a microRNA, a small non-protein coding RNA that belongs to a large group of microRNAs that include the stRNAs, lin-4 and let-7; the mir-35 genomic cluster of microRNAs consists of seven genes, that are similar in sequence, mir-35-mir-41; this group of microRNAs functions redundantly to control embryonic development and is expressed only during embryogenesis and in young adults with eggs. | Paper_evidence | WBPaper00004927 | |||||
WBPaper00010853 | |||||||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 07 Feb 2005 00:00:00 | ||||||||
Automated_description | Predicted to enable mRNA binding activity. Predicted to be involved in RNA destabilization. Expressed in germ line. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_transcript | Y62F5A.2 | |||||||
Y62F5A.2a | |||||||||
Y62F5A.2b | |||||||||
Other_sequence | AJ487559 | ||||||||
Experimental_info | Expr_pattern | Expr1653 | |||||||
Expr2530 | |||||||||
Expr8445 | |||||||||
Expr10897 | |||||||||
Drives_construct | WBCnstr00005504 | ||||||||
WBCnstr00005912 | |||||||||
WBCnstr00016916 | |||||||||
Construct_product | WBCnstr00016062 | ||||||||
WBCnstr00016063 | |||||||||
WBCnstr00016064 | |||||||||
Regulate_expr_cluster | WBPaper00040876:mir-35_downregulated | ||||||||
WBPaper00040876:mir-35_upregulated | |||||||||
WBPaper00050903:mir-35-41(nDf50)_20C_downregulated | |||||||||
WBPaper00050903:mir-35-41(nDf50)_20C_upregulated | |||||||||
WBPaper00050903:mir-35-41(nDf50)_25C_downregulated | |||||||||
WBPaper00050903:mir-35-41(nDf50)_25C_upregulated | |||||||||
Expression_cluster (28) | |||||||||
Interaction (11) | |||||||||
WBProcess | WBbiopr:00000016 | ||||||||
Map_info | Map | II | Position | 3.63227 | Error | 0.004834 | |||
Positive | Inside_rearr | nDf50 | |||||||
Positive_clone | Y62F5A | Inferred_automatically (2) | |||||||
Mapping_data | Pos_neg_data | 10914 | |||||||
Pseudo_map_position | |||||||||
Reference (55) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |