WormBase Tree Display for Gene: WBGene00003179
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WBGene00003179 | SMap | S_parent | Sequence | C52B9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | mec-18 | Person_evidence | WBPerson95 | |||||
Sequence_name | C52B9.9 | ||||||||
Molecular_name | C52B9.9 | ||||||||
C52B9.9.1 | |||||||||
CE16940 | |||||||||
Other_name | acs-8 | Person_evidence (2) | |||||||
CELE_C52B9.9 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | mec-18 | ||||||||
DB_info | Database | AceView | gene | XE890 | |||||
WormQTL | gene | WBGene00003179 | |||||||
WormFlux | gene | WBGene00003179 | |||||||
NDB | locus_tag | CELE_C52B9.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003179|UniProtKB=O45873 | |||||||
family | PTHR24096 | ||||||||
NCBI | gene | 180701 | |||||||
RefSeq | protein | NM_076330.8 | |||||||
TREEFAM | TREEFAM_ID | TF313958 | |||||||
TrEMBL | UniProtAcc | O45873 | |||||||
UniProt_GCRP | UniProtAcc | O45873 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 11 Sep 2008 09:57:25 | WBPerson2970 | Name_change | Other_name | acs-18 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mec | ||||||||
Allele (52) | |||||||||
Legacy_information | [C.elegansII] u228 : touch insensitive, lethargic.OA5: u69, u138, u182 etc. [Chalfie and Au 1989; Huang and Chalfie 1994; TU] | ||||||||
Strain | WBStrain00035050 | ||||||||
WBStrain00035036 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (15) | |||||||||
Ortholog (38) | |||||||||
Paralog (17) | |||||||||
Structured_description | Concise_description | mec-18 encodes a protein similar to firefly luciferase and plant protein 4-coumarate coA ligase; mec-18 is involved in sensory mechanotransduction; genetic interactions with other mec genes suggest that mec-18 may be involved in negative regulation of the degenerin channel in the touch receptor neurons; mec-18 is expressed exclusively in the touch cells. | Paper_evidence | WBPaper00001871 | |||||
WBPaper00005666 | |||||||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 12 Jun 2007 00:00:00 | ||||||||
Automated_description | Predicted to enable CoA-ligase activity. Involved in detection of mechanical stimulus involved in sensory perception of touch and mechanosensory behavior. Located in neuron projection and neuronal cell body. Expressed in PLML; PLMR; and touch receptor neurons. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C52B9.9 | |||||||
Corresponding_CDS_history | C52B9.9:wp108 | ||||||||
Corresponding_transcript | C52B9.9.1 | ||||||||
Other_sequence (4) | |||||||||
Associated_feature | WBsf237269 | ||||||||
Experimental_info | RNAi_result | WBRNAi00030076 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012300 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043019 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr269 | ||||||||
Expr11123 | |||||||||
Expr1023167 | |||||||||
Expr1146983 | |||||||||
Expr1170085 | |||||||||
Expr2013493 | |||||||||
Expr2031727 | |||||||||
Drives_construct (12) | |||||||||
Construct_product | WBCnstr00016622 | ||||||||
WBCnstr00036192 | |||||||||
Antibody | WBAntibody00002613 | ||||||||
WBAntibody00002621 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (114) | |||||||||
Interaction (23) | |||||||||
Map_info | Map | X | Position | -7.80366 | Error | 0.004168 | |||
Well_ordered | |||||||||
Positive | Positive_clone | C52B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 3626 | |||||||
4413 | |||||||||
5588 | |||||||||
Reference (31) | |||||||||
Method | Gene |