WormBase Tree Display for Gene: WBGene00002850
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WBGene00002850 | SMap | S_parent | Sequence | C16A3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | let-716 | Person_evidence | WBPerson533 | |||||
Sequence_name | C16A3.3 | ||||||||
Molecular_name | C16A3.3 | ||||||||
C16A3.3.1 | |||||||||
CE27690 | |||||||||
Other_name | CELE_C16A3.3 | Accession_evidence | NDB | BX284603 | |||||
Public_name | let-716 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00002850 | |||||
WormFlux | gene | WBGene00002850 | |||||||
NDB | locus_tag | CELE_C16A3.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00002850|UniProtKB=Q18038 | |||||||
family | PTHR23270 | ||||||||
NCBI | gene | 175906 | |||||||
RefSeq | protein | NM_065997.5 | |||||||
TREEFAM | TREEFAM_ID | TF105697 | |||||||
TrEMBL | UniProtAcc | Q18038 | |||||||
UniProt_GCRP | UniProtAcc | Q18038 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:29 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 30 Jan 2008 10:06:04 | WBPerson2970 | Event | Acquires_merge | WBGene00015808 | ||||
Name_change | Sequence_name | C16A3.3 | |||||||
Acquires_merge | WBGene00015808 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | let | ||||||||
Allele (64) | |||||||||
Legacy_information | [Stewart HI] homozygotes arrest at early larval stage | ||||||||
[C.elegansII] s2457 : early larval lethal. OA1: s2626 (similar). [BC] | |||||||||
Strain | WBStrain00000771 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00060046 | ||||||||
00060047 | |||||||||
00060048 | |||||||||
00060049 | |||||||||
00060050 | |||||||||
00110407 | |||||||||
00110408 | |||||||||
00110409 | |||||||||
Contained_in_operon | CEOP3368 | ||||||||
Ortholog (39) | |||||||||
Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in rRNA processing. Predicted to be located in nucleolus. Predicted to be part of small-subunit processome. Is an ortholog of human PDCD11 (programmed cell death 11). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C16A3.3 | |||||||
Corresponding_transcript | C16A3.3.1 | ||||||||
Other_sequence (35) | |||||||||
Associated_feature | WBsf659070 | ||||||||
WBsf225096 | |||||||||
Experimental_info | RNAi_result (24) | ||||||||
Expr_pattern (5) | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (121) | |||||||||
SAGE_tag (21) | |||||||||
Interaction (353) | |||||||||
Map_info | Map | III | Position | -1.31646 | Error | 0.00703 | |||
Well_ordered | |||||||||
Positive | Inside_rearr | sDf127 | |||||||
sDf125 | |||||||||
sDp3 | |||||||||
Positive_clone | C16A3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Mapping_data | Multi_point | 3328 | |||||||
Pos_neg_data | 8680 | ||||||||
8695 | |||||||||
8708 | |||||||||
8711 | |||||||||
8753 | |||||||||
8770 | |||||||||
9198 | |||||||||
Reference (8) | |||||||||
Remark | Rescue for s2457 was to fertile adult and for s2626 to sterile adult from early larval arrest stages. | ||||||||
Method | Gene |