WormBase Tree Display for Gene: WBGene00002201
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| WBGene00002201 | SMap | S_parent | Sequence | T17E9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | kin-18 | |||||||
| Sequence_name | T17E9.1 | ||||||||
| Molecular_name | T17E9.1a | ||||||||
| T17E9.1a.1 | |||||||||
| CE01405 | |||||||||
| T17E9.1b | |||||||||
| CE54063 | |||||||||
| T17E9.1b.1 | |||||||||
| Other_name | Sulu | Accession_evidence | EMBL | U32275 | |||||
| CELE_T17E9.1 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | kin-18 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | kin | ||||||||
| Allele (59) | |||||||||
| Legacy_information | [Cope MJT] e2630 is Tc1 insertion, no visible phenotype. Encodes 982 aa protein, residues 1-300 have similarity to Ser/Thr kinases, and this domain has kinase activity in vitro. In situ hybridization indicates widespread expression. Predicted gene T17E9.1 | ||||||||
| Strain | WBStrain00002055 | ||||||||
| WBStrain00005586 | |||||||||
| WBStrain00028926 | |||||||||
| WBStrain00035797 | |||||||||
| WBStrain00037785 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (30) | |||||||||
| Ortholog (48) | |||||||||
| Paralog (27) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein serine/threonine kinase activity. Involved in feeding behavior; regulation of meiosis I; and regulation of pharyngeal pumping. Located in cell cortex. Expressed in several structures, including alimentary muscle; excretory cell; intestine; nerve ring; and pharyngeal-intestinal valve. Is an ortholog of human TAOK1 (TAO kinase 1); TAOK2 (TAO kinase 2); and TAOK3 (TAO kinase 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T17E9.1a | |||||||
| T17E9.1b | |||||||||
| Corresponding_CDS_history | T17E9.1:wp82 | ||||||||
| T17E9.1b:wp91 | |||||||||
| T17E9.1b:wp275 | |||||||||
| Corresponding_transcript | T17E9.1a.1 | ||||||||
| T17E9.1b.1 | |||||||||
| Other_sequence | JI164021.1 | ||||||||
| Acan_isotig17325 | |||||||||
| CRC07511_1 | |||||||||
| PPC21313_1 | |||||||||
| EX561311.1 | |||||||||
| AS10985 | |||||||||
| Dviv_isotig26234 | |||||||||
| JI476635.1 | |||||||||
| ACC34977_1 | |||||||||
| Acan_isotig10337 | |||||||||
| Associated_feature | WBsf645243 | ||||||||
| WBsf992647 | |||||||||
| WBsf225051 | |||||||||
| WBsf225052 | |||||||||
| Experimental_info | RNAi_result (24) | ||||||||
| Expr_pattern | Chronogram381 | ||||||||
| Expr1743 | |||||||||
| Expr6702 | |||||||||
| Expr1028651 | |||||||||
| Expr1031288 | |||||||||
| Expr1157024 | |||||||||
| Expr2012930 | |||||||||
| Expr2031163 | |||||||||
| Drives_construct | WBCnstr00000013 | ||||||||
| WBCnstr00002839 | |||||||||
| WBCnstr00010425 | |||||||||
| WBCnstr00015162 | |||||||||
| WBCnstr00015857 | |||||||||
| Construct_product | WBCnstr00000013 | ||||||||
| WBCnstr00010425 | |||||||||
| WBCnstr00015764 | |||||||||
| WBCnstr00015765 | |||||||||
| Antibody | WBAntibody00000439 | ||||||||
| WBAntibody00000440 | |||||||||
| WBAntibody00002389 | |||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction (51) | |||||||||
| Map_info | Map | III | Position | -1.4176 | Error | 0.000744 | |||
| Positive | Positive_clone | T17E9 | Author_evidence | Cope MJT | |||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Mapping_data | Multi_point | 4457 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005033 | ||||||||
| WBPaper00019683 | |||||||||
| WBPaper00024295 | |||||||||
| WBPaper00027258 | |||||||||
| WBPaper00036989 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041637 | |||||||||
| WBPaper00046308 | |||||||||
| WBPaper00048709 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Data extracted from PhD thesis, MJT Cope (1996) | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
