WormBase Tree Display for Gene: WBGene00002076
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| WBGene00002076 | SMap | S_parent | Sequence | R06A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | imb-2 | Person_evidence | WBPerson1160 | |||||
| Sequence_name | R06A4.4 | ||||||||
| Molecular_name | R06A4.4a | ||||||||
| R06A4.4a.1 | |||||||||
| CE18111 | |||||||||
| R06A4.4b | |||||||||
| CE18112 | |||||||||
| R06A4.4c | |||||||||
| CE51280 | |||||||||
| R06A4.4b.1 | |||||||||
| R06A4.4c.1 | |||||||||
| Other_name | CELE_R06A4.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | imb-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | imb | ||||||||
| Allele (120) | |||||||||
| Possibly_affected_by | WBVar02156801 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00002002 | ||||||||
| 00002003 | |||||||||
| 00002004 | |||||||||
| 00002005 | |||||||||
| 00002006 | |||||||||
| 00002007 | |||||||||
| 00109980 | |||||||||
| 00109981 | |||||||||
| 00109982 | |||||||||
| Ortholog (47) | |||||||||
| Paralog | WBGene00002075 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00002077 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable nuclear import signal receptor activity and nuclear localization sequence binding activity. Predicted to be involved in protein import into nucleus. Predicted to be located in cytoplasm and nucleus. Expressed in AWC-ON; AWCL; and AWCR. Human ortholog(s) of this gene implicated in intellectual developmental disorder with hypotonia, impaired speech, and dysmorphic facies. Is an ortholog of human TNPO2 (transportin 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081262 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:19998) | ||||
| Molecular_info | Corresponding_CDS | R06A4.4a | |||||||
| R06A4.4b | |||||||||
| R06A4.4c | |||||||||
| Corresponding_transcript | R06A4.4a.1 | ||||||||
| R06A4.4b.1 | |||||||||
| R06A4.4c.1 | |||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf644844 | ||||||||
| WBsf990689 | |||||||||
| WBsf1013833 | |||||||||
| WBsf1013834 | |||||||||
| WBsf222453 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr15718 | ||||||||
| Expr15719 | |||||||||
| Expr1026647 | |||||||||
| Expr1031229 | |||||||||
| Expr1155050 | |||||||||
| Expr2012729 | |||||||||
| Expr2030966 | |||||||||
| Drives_construct | WBCnstr00036471 | ||||||||
| WBCnstr00042491 | |||||||||
| Construct_product | WBCnstr00036471 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction (219) | |||||||||
| Map_info | Map | II | Position | 22.9227 | Error | 0.002363 | |||
| Positive | Positive_clone | R06A4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (17) | |||||||||
| Remark | Sequence connection from [Mach KE] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
