WormBase Tree Display for Gene: WBGene00002075
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WBGene00002075 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | imb-1 | Person_evidence | WBPerson1160 | |||||
Sequence_name | F28B3.8 | ||||||||
Molecular_name | F28B3.8 | ||||||||
F28B3.8.1 | |||||||||
CE30523 | |||||||||
F28B3.8.2 | |||||||||
Other_name | let-595 | Person_evidence | WBPerson533 | ||||||
CELE_F28B3.8 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | imb-1 | ||||||||
DB_info | Database | AceView | gene | 1F490 | |||||
WormQTL | gene | WBGene00002075 | |||||||
WormFlux | gene | WBGene00002075 | |||||||
NDB | locus_tag | CELE_F28B3.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00002075|UniProtKB=Q9BIB8 | |||||||
family | PTHR10527 | ||||||||
NCBI | gene | 172110 | |||||||
RefSeq | protein | NM_059076.8 | |||||||
TREEFAM | TREEFAM_ID | TF105655 | |||||||
TrEMBL | UniProtAcc | Q9BIB8 | |||||||
UniProt_GCRP | UniProtAcc | Q9BIB8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 05 Mar 2015 10:07:07 | WBPerson2970 | Event | Acquires_merge | WBGene00002773 | ||||
Name_change | Other_name | let-595 | |||||||
Acquires_merge | WBGene00002773 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | imb | ||||||||
Allele (59) | |||||||||
Legacy_information | [C.elegansII] h353 : lethal. OA1: h372. [KR] | ||||||||
Strain | WBStrain00023767 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (41) | |||||||||
Paralog | WBGene00002077 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00002076 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable nuclear import signal receptor activity and nuclear localization sequence binding activity. Involved in embryo development and reproduction. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human KPNB1 (karyopherin subunit beta 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F28B3.8 | |||||||
Corresponding_transcript | F28B3.8.1 | ||||||||
F28B3.8.2 | |||||||||
Other_sequence (26) | |||||||||
Associated_feature | WBsf655250 | ||||||||
WBsf983541 | |||||||||
WBsf219334 | |||||||||
WBsf219335 | |||||||||
Experimental_info | RNAi_result | WBRNAi00062952 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00065351 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062939 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00116724 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062946 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00086897 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00045792 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014123 | ||||||||
Expr1031228 | |||||||||
Expr1149704 | |||||||||
Expr2012728 | |||||||||
Expr2030965 | |||||||||
Drives_construct | WBCnstr00036472 | ||||||||
Construct_product | WBCnstr00036472 | ||||||||
Microarray_results (22) | |||||||||
Expression_cluster (138) | |||||||||
Interaction (154) | |||||||||
Map_info | Map | I | Position | -0.582534 | Error | 0.015131 | |||
Representative_for | WBGene00002819 | ||||||||
WBGene00002821 | |||||||||
WBGene00002822 | |||||||||
WBGene00003934 | |||||||||
Positive | Positive_clone | F28B3 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference (12) | |||||||||
Remark | Sequence connection from [Mach KE] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |