WormBase Tree Display for Gene: WBGene00001945
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WBGene00001945 | SMap | S_parent | Sequence | F45E1 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | his | ||||||
Allele (20) | |||||||
Possibly_affected_by | WBVar02153220 | ||||||
Strain | WBStrain00032472 | ||||||
WBStrain00007466 | |||||||
WBStrain00007461 | |||||||
WBStrain00034735 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Ortholog (59) | |||||||
Paralog (24) | |||||||
Structured_description | Concise_description | his-71 encodes an H3 histone required for embryonic viability, body morphology, and larval viability. | Paper_evidence | WBPaper00004651 | |||
WBPaper00005654 | |||||||
Curator_confirmed | WBPerson48 | ||||||
WBPerson567 | |||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be located in nucleus. Predicted to be part of nucleosome. Expressed in several structures, including somatic cell. Is an ortholog of human H3-3A (H3.3 histone A) and H3-3B (H3.3 histone B). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | EFO:MONDO:0031200 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4764,HGNC:4765) | ||
Molecular_info | Corresponding_CDS | F45E1.6 | |||||
Corresponding_transcript | F45E1.6.1 | ||||||
Other_sequence (183) | |||||||
Associated_feature | WBsf1006004 | ||||||
WBsf1006005 | |||||||
WBsf1006006 | |||||||
WBsf1023340 | |||||||
WBsf237632 | |||||||
Experimental_info (8) | |||||||
Map_info | Map | X | Position | -0.766026 | Error | 0.018254 | |
Positive | Positive_clone | F45E1 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 5256 | |||||
Pseudo_map_position | |||||||
Reference (12) | |||||||
Remark | Sequence connection corrected from F54E1.6 [krb 030423] | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |