WormBase Tree Display for Gene: WBGene00001930
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| WBGene00001930 | SMap | S_parent | Sequence | F54E12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | his-56 | Person_evidence | WBPerson160 | |||||
| Sequence_name | F54E12.3 | ||||||||
| Molecular_name | F54E12.3 | ||||||||
| F54E12.3.1 | |||||||||
| CE03252 | |||||||||
| Other_name | CELE_F54E12.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | his-56 | ||||||||
| DB_info | Database | AceView | gene | 4M103 | |||||
| WormFlux | gene | WBGene00001930 | |||||||
| NDB | locus_tag | CELE_F54E12.3 | |||||||
| NCBI | gene | 178055 | |||||||
| RefSeq | protein | NM_069738.1 | |||||||
| SwissProt | UniProtAcc | P62784 | |||||||
| UniProt_GCRP | UniProtAcc | P62784 | |||||||
| OMIM | gene | 602826 | |||||||
| 602827 | |||||||||
| 602830 | |||||||||
| 602833 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | his | ||||||||
| Allele | WBVar02154292 | ||||||||
| WBVar01500079 | |||||||||
| WBVar01498996 | |||||||||
| WBVar01499925 | |||||||||
| WBVar01498645 | |||||||||
| WBVar01499585 | |||||||||
| WBVar01499586 | |||||||||
| WBVar01499798 | |||||||||
| WBVar01500245 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00109730 | ||||||||
| 00109731 | |||||||||
| 00109732 | |||||||||
| Ortholog (85) | |||||||||
| Paralog (15) | |||||||||
| Structured_description | Concise_description | his-56 encodes an H4 histone. | Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Is an ortholog of several human genes including H4C1 (H4 clustered histone 1); H4C4 (H4 clustered histone 4); and H4C9 (H4 clustered histone 9). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | EFO:MONDO:0031400 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4785,HGNC:4787,HGNC:4790,HGNC:4793) | ||||
| Molecular_info | Corresponding_CDS | F54E12.3 | |||||||
| Corresponding_transcript | F54E12.3.1 | ||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf1018197 | ||||||||
| WBsf229147 | |||||||||
| WBsf229148 | |||||||||
| WBsf229149 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr1152131 | ||||||||
| Expr2030703 | |||||||||
| Drives_construct | WBCnstr00036585 | ||||||||
| Construct_product | WBCnstr00021508 | ||||||||
| WBCnstr00036585 | |||||||||
| Microarray_results | SMD_F54E12.3 | ||||||||
| Expression_cluster (68) | |||||||||
| Interaction (261) | |||||||||
| Map_info | Map | IV | Position | 4.96033 | |||||
| Positive | Positive_clone | F54E12 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00040135 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057312 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
