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WormBase Tree Display for Gene: WBGene00001779

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Name Class

WBGene00001779EvidencePerson_evidenceWBPerson1846
SMapS_parentSequenceY53F4B
IdentityVersion1
NameCGC_namegst-31
Sequence_nameY53F4B.35
Molecular_nameY53F4B.35
Y53F4B.35.1
CE22421
Other_nameCELE_Y53F4B.35Accession_evidenceNDBBX284602
Public_namegst-31
DB_infoDatabaseAceViewgene2P460
WormQTLgeneWBGene00001779
WormFluxgeneWBGene00001779
NDBlocus_tagCELE_Y53F4B.35
PanthergeneCAEEL|WormBase=WBGene00001779|UniProtKB=Q9NAA9
familyPTHR11571
NCBIgene190228
RefSeqproteinNM_064720.2
TREEFAMTREEFAM_IDTF353041
TrEMBLUniProtAccQ9NAA9
UniProt_GCRPUniProtAccQ9NAA9
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgst
Allele (16)
RNASeq_FPKM (74)
GO_annotation00095917
Ortholog (48)
Paralog (45)
Structured_descriptionAutomated_descriptionEnriched in anterior hypodermis; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq and microarray studies. Is affected by twenty chemicals including 1-methylnicotinamide; methylmercuric chloride; and Mercuric Chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Glutathione S-transferase, N-terminal; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain superfamily; Glutathione S-transferase, C-terminal; and Thioredoxin-like superfamily.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY53F4B.35
Corresponding_transcriptY53F4B.35.1
Other_sequenceCJC17259_1
CJC00195_1
Associated_featureWBsf990919
WBsf990920
WBsf1013960
WBsf1013961
Experimental_infoRNAi_resultWBRNAi00115544Inferred_automaticallyRNAi_primary
WBRNAi00037428Inferred_automaticallyRNAi_primary
WBRNAi00115479Inferred_automaticallyRNAi_primary
WBRNAi00020948Inferred_automaticallyRNAi_primary
WBRNAi00057291Inferred_automaticallyRNAi_primary
Expr_patternExpr1016335
Expr1160727
Expr2012316
Expr2030552
Drives_constructWBCnstr00036692
Construct_productWBCnstr00036692
Microarray_results (13)
Expression_cluster (130)
Map_infoMapIIPosition24.3622Error0.006135
PositivePositive_cloneY53F4BInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00044018
WBPaper00055090
WBPaper00062289
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene