WormBase Tree Display for Gene: WBGene00001664
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WBGene00001664 | SMap | S_parent | Sequence | F38E1 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | gpa | |||||
Allele (41) | ||||||
Legacy_information | [C.elegansII] pk19, pk2, pk23, pk24, pk16. Tc1 insertion, also excision derivatives: no obvious phenotype, some reduction in dauer formation, stronger with gpa-3(O). Cloned: gpa-2:lacZ expressed in phasmid neurons, some nerve ring neurons, PVT, sphincter. [Lochrie et al. 1991; PS; NL] | |||||
Strain | WBStrain00028899 | |||||
WBStrain00028902 | ||||||
WBStrain00007863 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation (25) | ||||||
Ortholog (45) | ||||||
Paralog (21) | ||||||
Structured_description | Concise_description | gpa-2 encodes a member of the G protein alpha subunit family of heterotrimeric GTPases that is involved in dauer formation and chemotaxis to water-soluble odorants; it is expressed in the phasmid neurons PHA and PHB, three pharyngeal neurons, one interneuron, three pairs of head neurons, and the anal sphincter muscle. | Curator_confirmed | WBPerson48 | ||
WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Automated_description | Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Involved in several processes, including defense response to Gram-negative bacterium; olfactory learning; and positive regulation of gene expression. Located in axon; neuronal cell body; and non-motile cilium. Expressed in anal sphincter muscle; ganglia; and pharyngeal cell. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F38E1.5 | ||||
Corresponding_transcript | F38E1.5.1 | |||||
Associated_feature | WBsf1000639 | |||||
WBsf1000640 | ||||||
WBsf1020020 | ||||||
WBsf232099 | ||||||
Experimental_info | RNAi_result | WBRNAi00103344 | Inferred_automatically | RNAi_primary | ||
WBRNAi00046709 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00103347 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00014559 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00014563 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00046710 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr538 | |||||
Expr539 | ||||||
Expr3065 | ||||||
Expr1023128 | ||||||
Expr1150590 | ||||||
Expr2012191 | ||||||
Expr2030427 | ||||||
Marker43 | ||||||
Drives_construct | WBCnstr00001699 | |||||
WBCnstr00004639 | ||||||
WBCnstr00004642 | ||||||
WBCnstr00012427 | ||||||
WBCnstr00012428 | ||||||
WBCnstr00036791 | ||||||
Construct_product | WBCnstr00001699 | |||||
WBCnstr00004642 | ||||||
WBCnstr00012427 | ||||||
WBCnstr00012428 | ||||||
WBCnstr00036791 | ||||||
Antibody | WBAntibody00000769 | |||||
Microarray_results (20) | ||||||
Expression_cluster (118) | ||||||
Interaction (17) | ||||||
Anatomy_function | WBbtf0865 | |||||
WBbtf0866 | ||||||
Map_info (4) | ||||||
Reference (70) | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |