WormBase Tree Display for Gene: WBGene00001594
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| WBGene00001594 | SMap | S_parent | Sequence | C27H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | glc-4 | Person_evidence | WBPerson32 | |||||
| Sequence_name | C27H5.8 | ||||||||
| Molecular_name | C27H5.8 | ||||||||
| C27H5.8.1 | |||||||||
| CE32152 | |||||||||
| Other_name | CELE_C27H5.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | glc-4 | ||||||||
| DB_info | Database | AceView | gene | 2H462 | |||||
| WormQTL | gene | WBGene00001594 | |||||||
| WormFlux | gene | WBGene00001594 | |||||||
| NDB | locus_tag | CELE_C27H5.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001594|UniProtKB=Q95QT7 | |||||||
| family | PTHR18945 | ||||||||
| NCBI | gene | 182971 | |||||||
| RefSeq | protein | NM_063088.6 | |||||||
| TrEMBL | UniProtAcc | Q95QT7 | |||||||
| UniProt_GCRP | UniProtAcc | Q95QT7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | glc | ||||||||
| Allele (31) | |||||||||
| Strain | WBStrain00003318 | ||||||||
| WBStrain00022217 | |||||||||
| WBStrain00031398 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (31) | |||||||||
| Paralog (100) | |||||||||
| Structured_description | Concise_description | glc-4 encodes a predicted glutamate-gated chloride channel that affects ivermectin sensitivity and reversal behavior and genetically interacts with avr-14; expressed in neurons. | Paper_evidence | WBPaper00010338 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to contribute to chloride channel activity. Predicted to be involved in chloride transmembrane transport. Predicted to be located in neuron projection and synapse. Expressed in AIYL and AIYR. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C27H5.8 | |||||||
| Corresponding_CDS_history | C27H5.8:wp88 | ||||||||
| Corresponding_transcript | C27H5.8.1 | ||||||||
| Other_sequence (31) | |||||||||
| Associated_feature | WBsf717695 | ||||||||
| WBsf988374 | |||||||||
| WBsf988375 | |||||||||
| WBsf1012496 | |||||||||
| WBsf223306 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041379 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022293 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram126 | ||||||||
| Expr5365 | |||||||||
| Expr15924 | |||||||||
| Expr15926 | |||||||||
| Expr1025833 | |||||||||
| Expr1030955 | |||||||||
| Expr1145413 | |||||||||
| Expr2012082 | |||||||||
| Expr2030318 | |||||||||
| Drives_construct | WBCnstr00003789 | ||||||||
| WBCnstr00036838 | |||||||||
| WBCnstr00042609 | |||||||||
| Construct_product | WBCnstr00036838 | ||||||||
| WBCnstr00042607 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (158) | |||||||||
| Interaction | WBInteraction000248815 | ||||||||
| WBInteraction000355024 | |||||||||
| WBInteraction000450461 | |||||||||
| WBInteraction000576861 | |||||||||
| WBInteraction000576862 | |||||||||
| Map_info | Map | II | Position | 0.497042 | Error | 0.00038 | |||
| Positive | Positive_clone | C27H5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4349 | |||||||
| 4350 | |||||||||
| 4568 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Sequence connection from [Dent JA] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
