WormBase Tree Display for Gene: WBGene00001582
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| WBGene00001582 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K02A11 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | gfi-2 | Person_evidence | WBPerson1796 | |||||
| Sequence_name | K02A11.1 | ||||||||
| Molecular_name (11) | |||||||||
| Other_name | CELE_K02A11.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | gfi-2 | ||||||||
| DB_info | Database | AceView | gene | 1K319 | |||||
| WormQTL | gene | WBGene00001582 | |||||||
| WormFlux | gene | WBGene00001582 | |||||||
| NDB | locus_tag | CELE_K02A11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001582|UniProtKB=Q95ZS1 | |||||||
| family | PTHR24186 | ||||||||
| NCBI | gene | 172825 | |||||||
| RefSeq | protein | NM_001381135.1 | |||||||
| NM_001381136.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF316803 | |||||||
| TrEMBL | UniProtAcc | P90902 | |||||||
| Q95ZS1 | |||||||||
| UniProt_GCRP | UniProtAcc | Q95ZS1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gfi | ||||||||
| Allele (82) | |||||||||
| Strain | WBStrain00051374 | ||||||||
| WBStrain00051925 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00049435 | ||||||||
| 00049436 | |||||||||
| 00049437 | |||||||||
| Ortholog (44) | |||||||||
| Structured_description | Automated_description | Predicted to enable enzyme inhibitor activity and myosin phosphatase regulator activity. Predicted to be located in cytoplasm. Is an ortholog of human PPP1R16A (protein phosphatase 1 regulatory subunit 16A) and PPP1R16B (protein phosphatase 1 regulatory subunit 16B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K02A11.1a | |||||||
| K02A11.1b | |||||||||
| Corresponding_transcript | K02A11.1a.1 | ||||||||
| K02A11.1a.2 | |||||||||
| K02A11.1a.3 | |||||||||
| K02A11.1a.4 | |||||||||
| K02A11.1a.5 | |||||||||
| K02A11.1b.1 | |||||||||
| K02A11.1b.2 | |||||||||
| Other_sequence (27) | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result (22) | ||||||||
| Expr_pattern | Expr1020537 | ||||||||
| Expr1030948 | |||||||||
| Expr1153372 | |||||||||
| Expr2012028 | |||||||||
| Expr2030264 | |||||||||
| Drives_construct | WBCnstr00036846 | ||||||||
| Construct_product | WBCnstr00036846 | ||||||||
| Microarray_results (33) | |||||||||
| Expression_cluster (106) | |||||||||
| Interaction (70) | |||||||||
| Map_info | Map | I | Position | 3.88689 | Error | 0.002603 | |||
| Positive | Positive_clone | K02A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00018124 | ||||||||
| WBPaper00032236 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Sequence connection from [Qadota H, Kaibuchi K] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
