WormBase Tree Display for Gene: WBGene00001352
expand all nodes | collapse all nodes | view schema
| WBGene00001352 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | evl-14 | Person_evidence | WBPerson220 | |||||
| Sequence_name | H38K22.1 | ||||||||
| Molecular_name | H38K22.1 | ||||||||
| H38K22.1.1 | |||||||||
| CE33526 | |||||||||
| Other_name | CELE_H38K22.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | evl-14 | ||||||||
| DB_info | Database | AceView | gene | 3F394 | |||||
| WormQTL | gene | WBGene00001352 | |||||||
| WormFlux | gene | WBGene00001352 | |||||||
| NDB | locus_tag | CELE_H38K22.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001352|UniProtKB=G5EC05 | |||||||
| family | PTHR12663 | ||||||||
| NCBI | gene | 175555 | |||||||
| RefSeq | protein | NM_065464.9 | |||||||
| TREEFAM | TREEFAM_ID | TF106415 | |||||||
| TrEMBL | UniProtAcc | G5EC05 | |||||||
| UniProt_GCRP | UniProtAcc | G5EC05 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | evl | ||||||||
| Allele (115) | |||||||||
| Legacy_information | [C.elegansII] ar96 : everted vulva, sterile; no L4 vulval invagination; abnormal uterus and oocytes.OA2: ar97, ar112 (both similar)[Seydoux et al., 1993] | ||||||||
| Strain | WBStrain00007988 | ||||||||
| WBStrain00007990 | |||||||||
| WBStrain00008002 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00010686 | ||||||||
| 00010687 | |||||||||
| 00010688 | |||||||||
| 00010689 | |||||||||
| 00010690 | |||||||||
| 00010691 | |||||||||
| 00010692 | |||||||||
| 00108614 | |||||||||
| Contained_in_operon | CEOP3168 | ||||||||
| Ortholog (40) | |||||||||
| Structured_description | Concise_description | evl-14 encodes a homolog of the yeast sister cohesion protein Pds5p that functions during both mitosis and meiosis and is implicated in the maintenance of sister chromatid cohesion in late prophase, and affects vulval morphology, meiotic germline development, embryonic and larval viability, fertility, and cell divisions in the germ line as well as in vulval and somatic gonad lineages; some of the defects, such as somatic gonad defects, are due at least partially to cell division defects. | Paper_evidence | WBPaper00001738 | |||||
| WBPaper00006163 | |||||||||
| WBPaper00018756 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Involved in meiotic sister chromatid cohesion and mitotic sister chromatid cohesion. Predicted to be located in nucleus. Predicted to be part of chromatin. Is an ortholog of human PDS5A (PDS5 cohesin associated factor A) and PDS5B (PDS5 cohesin associated factor B). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H38K22.1 | |||||||
| Corresponding_CDS_history | H38K22.1:wp96 | ||||||||
| Corresponding_transcript | H38K22.1.1 | ||||||||
| Other_sequence | CRC10249_1 | ||||||||
| CR05570 | |||||||||
| CR00988 | |||||||||
| CRC11009_1 | |||||||||
| EX011908.1 | |||||||||
| ES409792.1 | |||||||||
| EX007944.1 | |||||||||
| CBC07810_1 | |||||||||
| Associated_feature | WBsf666777 | ||||||||
| WBsf666778 | |||||||||
| WBsf992085 | |||||||||
| WBsf226515 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr1026324 | ||||||||
| Expr1030821 | |||||||||
| Expr1153269 | |||||||||
| Expr2011387 | |||||||||
| Expr2029623 | |||||||||
| Drives_construct | WBCnstr00036990 | ||||||||
| Construct_product | WBCnstr00036990 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (110) | |||||||||
| Interaction (27) | |||||||||
| Map_info | Map | III | Position | -3.1961 | Error | 0.00445 | |||
| Positive | Positive_clone | H38K22 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 3468 | |||||||
| 3469 | |||||||||
| 3470 | |||||||||
| Reference | WBPaper00001738 | ||||||||
| WBPaper00006163 | |||||||||
| WBPaper00016632 | |||||||||
| WBPaper00017125 | |||||||||
| WBPaper00017600 | |||||||||
| WBPaper00018756 | |||||||||
| WBPaper00032309 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065070 | |||||||||
| Method | Gene |
