WormBase Tree Display for Gene: WBGene00000965
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| WBGene00000965 | SMap | S_parent | Sequence | C01G8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dhs-1 | Person_evidence | WBPerson651 | |||||
| Sequence_name | C01G8.3 | ||||||||
| Molecular_name | C01G8.3 | ||||||||
| C01G8.3.1 | |||||||||
| CE07803 | |||||||||
| Other_name | CELE_C01G8.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | dhs-1 | ||||||||
| DB_info | Database | AceView | gene | 1F848 | |||||
| WormQTL | gene | WBGene00000965 | |||||||
| WormFlux | gene | WBGene00000965 | |||||||
| NDB | locus_tag | CELE_C01G8.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000965|UniProtKB=P91013 | |||||||
| family | PTHR24320 | ||||||||
| NCBI | gene | 172172 | |||||||
| RefSeq | protein | NM_059156.7 | |||||||
| TrEMBL | UniProtAcc | P91013 | |||||||
| UniProt_GCRP | UniProtAcc | P91013 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dhs | ||||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00049798 | ||||||||
| Contained_in_operon | CEOP1232 | ||||||||
| Ortholog (33) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Enriched in germ line and hypodermis based on tiling array and RNA-seq studies. Is affected by several genes including skn-1; let-7; and gld-1 based on microarray; proteomic; and RNA-seq studies. Is affected by seven chemicals including Zidovudine; paraquat; and Atrazine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Short-chain dehydrogenase/reductase SDR; short chain dehydrogenase; and NAD(P)-binding domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C01G8.3 | |||||||
| Corresponding_transcript | C01G8.3.1 | ||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf219399 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00022271 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062103 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028312 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039363 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019826 | ||||||||
| Expr1030600 | |||||||||
| Expr1143479 | |||||||||
| Expr2010903 | |||||||||
| Expr2029142 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (101) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | I | Position | -0.195456 | Error | 0.005451 | |||
| Positive | Positive_clone | C01G8 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028527 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
