WormBase Tree Display for Gene: WBGene00000774

WBGene00000774 Evidence: Person_evidence: WBPerson71
      WBPerson395
  SMap: S_parent: Sequence: F56A8
  Identity: Version: 1
    Name: CGC_name: cpf-2 Person_evidence: WBPerson71
      Sequence_name: F56A8.6
      Molecular_name: F56A8.6
        F56A8.6.1
        CE16126
      Other_name: CELE_F56A8.6 Accession_evidence: NDB BX284603
      Public_name: cpf-2
    DB_info: Database: AceView gene 3O356
        WormQTL gene WBGene00000774
        WormFlux gene WBGene00000774
        NDB locus_tag CELE_F56A8.6
        Panther gene CAEEL|WormBase=WBGene00000774|UniProtKB=O45577
          family PTHR45735
        NCBI gene 176742
        RefSeq protein NM_067333.5
        TREEFAM TREEFAM_ID TF314948
        TrEMBL UniProtAcc O45577
        UniProt_GCRP UniProtAcc O45577
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpf
    Allele (28)
    Possibly_affected_by: WBVar02158937
    Strain: WBStrain00049358
    RNASeq_FPKM (74)
    GO_annotation: 00034793
      00034794
      00034795
      00034796
      00034797
      00034798
      00034799
      00107775
      00107776
      00107777
    Ortholog (37)
    Paralog: WBGene00011155 Caenorhabditis elegans From_analysis: Panther
      WBGene00011059 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00011156 Caenorhabditis elegans From_analysis: Panther
      WBGene00006697 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016245 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00022351 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable mRNA binding activity. Predicted to be involved in mRNA 3'-end processing. Located in nuclear speck. Is an ortholog of human CSTF2 (cleavage stimulation factor subunit 2) and CSTF2T (cleavage stimulation factor subunit 2 tau variant). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F56A8.6
    Corresponding_transcript: F56A8.6.1
    Other_sequence (52)
    Associated_feature: WBsf651568
      WBsf716761
      WBsf718013
      WBsf994846
      WBsf227722
      WBsf227723
  Experimental_info: RNAi_result (23)
    Expr_pattern: Expr1026988
      Expr1030478
      Expr1152391
      Expr2010481
      Expr2028721
    Drives_construct: WBCnstr00037287
    Construct_product: WBCnstr00037287
    Antibody: WBAntibody00000415
      WBAntibody00002701
    Microarray_results (21)
    Expression_cluster (80)
    Interaction (165)
  Map_info: Map: III Position: 21.1667 Error: 0.013483
    Positive: Positive_clone: F56A8 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (14)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene