WormBase Tree Display for Gene: WBGene00000735
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| WBGene00000735 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | Y2H9A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-162 | Person_evidence | WBPerson345 | |||||
| Sequence_name | Y2H9A.3 | ||||||||
| Molecular_name | Y2H9A.3 | ||||||||
| Y2H9A.3.1 | |||||||||
| CE21291 | |||||||||
| Other_name | CELE_Y2H9A.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | col-162 | ||||||||
| DB_info | Database | AceView | gene | 5N923 | |||||
| WormQTL | gene | WBGene00000735 | |||||||
| WormFlux | gene | WBGene00000735 | |||||||
| NDB | locus_tag | CELE_Y2H9A.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000735|UniProtKB=Q9U2P5 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 179825 | |||||||
| RefSeq | protein | NM_073933.6 | |||||||
| TREEFAM | TREEFAM_ID | TF316783 | |||||||
| TrEMBL | UniProtAcc | Q9U2P5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U2P5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099486 | ||||||||
| 00099487 | |||||||||
| 00099488 | |||||||||
| 00107723 | |||||||||
| Ortholog (58) | |||||||||
| Paralog (170) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y2H9A.3 | |||||||
| Corresponding_transcript | Y2H9A.3.1 | ||||||||
| Other_sequence (40) | |||||||||
| Associated_feature | WBsf232772 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020160 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042852 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012177 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055765 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1159297 | ||||||||
| Expr2010357 | |||||||||
| Expr2028600 | |||||||||
| Drives_construct | WBCnstr00037323 | ||||||||
| Construct_product | WBCnstr00037323 | ||||||||
| Microarray_results | SMD_Y2H9A.3 | ||||||||
| A_12_P131725 | |||||||||
| Aff_Y2H9.B | |||||||||
| GPL3518_CE21291 | |||||||||
| Expression_cluster (216) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | V | Position | 5.34563 | Error | 0.000614 | |||
| Positive | Positive_clone | Y2H9A | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
