WormBase Tree Display for Gene: WBGene00000706
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WBGene00000706 | Evidence | Person_evidence | WBPerson345 | ||||||
---|---|---|---|---|---|---|---|---|---|
WBPerson651 | |||||||||
SMap | S_parent | Sequence | C39E9 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | col-132 | Person_evidence | WBPerson345 | |||||
Sequence_name | C39E9.9 | ||||||||
Molecular_name | C39E9.9 | ||||||||
C39E9.9.1 | |||||||||
CE05392 | |||||||||
Other_name | CELE_C39E9.9 | Accession_evidence | NDB | BX284604 | |||||
Public_name | col-132 | ||||||||
DB_info | Database | AceView | gene | 4N854 | |||||
WormQTL | gene | WBGene00000706 | |||||||
WormFlux | gene | WBGene00000706 | |||||||
NDB | locus_tag | CELE_C39E9.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000706|UniProtKB=Q18536 | |||||||
family | PTHR24637 | ||||||||
NCBI | gene | 183347 | |||||||
RefSeq | protein | NM_070113.3 | |||||||
TREEFAM | TREEFAM_ID | TF319073 | |||||||
TrEMBL | UniProtAcc | Q18536 | |||||||
UniProt_GCRP | UniProtAcc | Q18536 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | col | ||||||||
Allele (36) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00061599 | ||||||||
00061600 | |||||||||
00061601 | |||||||||
00107696 | |||||||||
Ortholog (27) | |||||||||
Paralog (161) | |||||||||
Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C39E9.9 | |||||||
Corresponding_transcript | C39E9.9.1 | ||||||||
Other_sequence | LSC00610_1 | ||||||||
DN557409.1 | |||||||||
Associated_feature | WBsf652323 | ||||||||
WBsf231083 | |||||||||
Experimental_info | RNAi_result | WBRNAi00042227 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011794 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029695 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1015673 | ||||||||
Expr1030425 | |||||||||
Expr1146218 | |||||||||
Expr2010328 | |||||||||
Expr2028572 | |||||||||
Drives_construct | WBCnstr00037351 | ||||||||
Construct_product | WBCnstr00037351 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (62) | |||||||||
Interaction | WBInteraction000297096 | ||||||||
WBInteraction000317526 | |||||||||
WBInteraction000325804 | |||||||||
WBInteraction000453085 | |||||||||
Map_info | Map | IV | Position | 7.82751 | Error | 0.010136 | |||
Positive | Positive_clone | C39E9 | Inferred_automatically (2) | ||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005747 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |