WormBase Tree Display for Gene: WBGene00000685
expand all nodes | collapse all nodes | view schema
WBGene00000685 | Evidence | Person_evidence (2) | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F29B9 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | col-111 | Person_evidence | WBPerson345 | |||||
Sequence_name | F29B9.9 | ||||||||
Molecular_name | F29B9.9a | ||||||||
F29B9.9a.1 | |||||||||
CE34831 | |||||||||
F29B9.9b | |||||||||
CE48577 | |||||||||
F29B9.9b.1 | |||||||||
Other_name | CELE_F29B9.9 | Accession_evidence | NDB | BX284604 | |||||
Public_name | col-111 | ||||||||
DB_info | Database | AceView | gene | 4F420 | |||||
WormQTL | gene | WBGene00000685 | |||||||
WormFlux | gene | WBGene00000685 | |||||||
NDB | locus_tag | CELE_F29B9.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000685|UniProtKB=Q9GYI3 | |||||||
family | PTHR24637 | ||||||||
NCBI | gene | 177230 | |||||||
RefSeq | protein | NM_001392302.1 | |||||||
NM_068206.7 | |||||||||
TrEMBL | UniProtAcc | Q9GYI3 | |||||||
U4PM21 | |||||||||
UniProt_GCRP | UniProtAcc | Q9GYI3 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | col | ||||||||
Allele (34) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00092708 | ||||||||
00092709 | |||||||||
00092710 | |||||||||
00107679 | |||||||||
Ortholog (19) | |||||||||
Paralog (161) | |||||||||
Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F29B9.9a | |||||||
F29B9.9b | |||||||||
Corresponding_CDS_history | F29B9.9:wp105 | ||||||||
Corresponding_transcript | F29B9.9a.1 | ||||||||
F29B9.9b.1 | |||||||||
Other_sequence | CBC05564_1 | ||||||||
EH362745.1 | |||||||||
Dviv_isotig25238 | |||||||||
OOC00168_1 | |||||||||
PPC14428_1 | |||||||||
NBC02827_1 | |||||||||
CJC10439_1 | |||||||||
BM174615.1 | |||||||||
Associated_feature | WBsf651758 | ||||||||
WBsf651759 | |||||||||
WBsf667633 | |||||||||
WBsf667898 | |||||||||
WBsf229992 | |||||||||
Experimental_info | RNAi_result | WBRNAi00014098 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00045906 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000931 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00031566 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1017753 | ||||||||
Expr1030409 | |||||||||
Expr1149809 | |||||||||
Expr2010309 | |||||||||
Expr2028553 | |||||||||
Drives_construct | WBCnstr00037370 | ||||||||
Construct_product | WBCnstr00037370 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (237) | |||||||||
Interaction (153) | |||||||||
Map_info | Map | IV | Position | 0.582629 | Error | 0.008993 | |||
Positive | Positive_clone | F29B9 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference (3) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |