WormBase Tree Display for Gene: WBGene00000664
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WBGene00000664 | Evidence | Person_evidence | WBPerson345 | ||||||
---|---|---|---|---|---|---|---|---|---|
WBPerson651 | |||||||||
SMap | S_parent | Sequence | F17C8 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | col-89 | Person_evidence | WBPerson345 | |||||
Sequence_name | F17C8.2 | ||||||||
Molecular_name | F17C8.2 | ||||||||
F17C8.2.1 | |||||||||
CE00956 | |||||||||
Other_name | CELE_F17C8.2 | Accession_evidence | NDB | BX284603 | |||||
Public_name | col-89 | ||||||||
DB_info | Database | AceView | gene | 3F837 | |||||
WormQTL | gene | WBGene00000664 | |||||||
WormFlux | gene | WBGene00000664 | |||||||
NDB | locus_tag | CELE_F17C8.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000664|UniProtKB=Q19528 | |||||||
family | PTHR24637 | ||||||||
NCBI | gene | 175627 | |||||||
RefSeq | protein | NM_065574.4 | |||||||
TREEFAM | TREEFAM_ID | TF316783 | |||||||
TrEMBL | UniProtAcc | Q19528 | |||||||
UniProt_GCRP | UniProtAcc | Q19528 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | col | ||||||||
Allele (18) | |||||||||
Strain | WBStrain00002199 | ||||||||
WBStrain00002200 | |||||||||
WBStrain00002326 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00065006 | ||||||||
00065007 | |||||||||
00105685 | |||||||||
00107659 | |||||||||
Ortholog (29) | |||||||||
Paralog (39) | |||||||||
Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Involved in IRE1-mediated unfolded protein response. Predicted to be part of collagen trimer. Expressed in head; neurons; and tail. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F17C8.2 | |||||||
Corresponding_transcript | F17C8.2.1 | ||||||||
Other_sequence (273) | |||||||||
Associated_feature (4) | |||||||||
Experimental_info | RNAi_result (5) | ||||||||
Expr_pattern | Chronogram335 | ||||||||
Chronogram1774 | |||||||||
Expr5782 | |||||||||
Expr5783 | |||||||||
Expr12109 | |||||||||
Expr1019190 | |||||||||
Expr1030391 | |||||||||
Expr1148849 | |||||||||
Expr2010435 | |||||||||
Expr2028675 | |||||||||
Drives_construct | WBCnstr00002942 | ||||||||
WBCnstr00002943 | |||||||||
WBCnstr00004466 | |||||||||
WBCnstr00037387 | |||||||||
Construct_product | WBCnstr00037387 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (234) | |||||||||
Interaction (21) | |||||||||
Map_info | Map | III | Position | -2.60226 | Error | 0.00352 | |||
Positive | Positive_clone | F17C8 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |