WormBase Tree Display for Gene: WBGene00000646
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| WBGene00000646 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | H17B01 | ||||||
| Identity | Version | 2 | |||||||
| Name | Sequence_name | H17B01.2 | |||||||
| Molecular_name | H17B01.2 | ||||||||
| H17B01.2.1 | |||||||||
| CE50992 | |||||||||
| Other_name | col-70 | Person_evidence | WBPerson345 | ||||||
| CELE_H17B01.2 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | H17B01.2 | ||||||||
| DB_info | Database | AceView | gene | 2B759 | |||||
| WormQTL | gene | WBGene00000646 | |||||||
| WormFlux | gene | WBGene00000646 | |||||||
| NDB | locus_tag | CELE_H17B01.2 | |||||||
| NCBI | gene | 186749 | |||||||
| RefSeq | protein | NM_061577.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322784 | |||||||
| TrEMBL | UniProtAcc | O61209 | |||||||
| UniProt_GCRP | UniProtAcc | O61209 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 22 May 2015 12:34:55 | WBPerson2970 | Name_change | Other_name | col-70 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (43) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00035886 | ||||||||
| Ortholog (22) | |||||||||
| Paralog | WBGene00021779 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021791 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H17B01.2 | |||||||
| Corresponding_CDS_history | H17B01.2:wp249 | ||||||||
| Corresponding_transcript | H17B01.2.1 | ||||||||
| Other_sequence | FC811069.1 | ||||||||
| SRC09926_1 | |||||||||
| Associated_feature | WBsf986704 | ||||||||
| WBsf1011568 | |||||||||
| Experimental_info | Expr_pattern | Expr1022877 | |||||||
| Expr1153152 | |||||||||
| Expr2022786 | |||||||||
| Drives_construct | WBCnstr00037988 | ||||||||
| Construct_product | WBCnstr00037988 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (170) | |||||||||
| Map_info | Map | II | Position | -15.4392 | Error | 0.001869 | |||
| Positive | Positive_clone | H17B01 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
