WormBase Tree Display for Gene: WBGene00000433
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| WBGene00000433 | SMap | S_parent | Sequence | ZK265 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ceh-8 | Person_evidence | WBPerson83 | |||||
| Sequence_name | ZK265.4 | ||||||||
| Molecular_name | ZK265.4a | ||||||||
| ZK265.4a.1 | |||||||||
| CE38130 | |||||||||
| ZK265.4b | |||||||||
| CE51184 | |||||||||
| ZK265.4c | |||||||||
| CE51174 | |||||||||
| ZK265.4b.1 | |||||||||
| ZK265.4c.1 | |||||||||
| Other_name | CELE_ZK265.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ceh-8 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ceh | ||||||||
| Allele (62) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes homeoprotein. [Burglin et al. 1989] | ||||||||
| Strain | WBStrain00048956 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (41) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Concise_description | ceh-8 encodes a paired-like homeodomain protein of the Q50 class orthologous to the Rx homeobox protein of humans (RAX; OMIM:601881) and Drosophila (CG10052-PA); CEH-8 and RX belong to one of at least 18 distinct families of paired-like homeodomain proteins, including 12 families in the Q50 class. | Paper_evidence | WBPaper00004283 | |||||
| WBPaper00012756 | |||||||||
| WBPaper00012789 | |||||||||
| WBPaper00012805 | |||||||||
| WBPaper00013587 | |||||||||
| WBPaper00013612 | |||||||||
| WBPaper00021087 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson324 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in lateral ganglion and somatic gonad precursor. Human ortholog(s) of this gene implicated in isolated microphthalmia 3 and retinal degeneration (multiple). Is an ortholog of human RAX2 (retina and anterior neural fold homeobox 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060842 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18662) | ||||
| DOID:0111018 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18286) | ||||||
| DOID:10584 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18286) | ||||||
| DOID:0110018 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18286) | ||||||
| Molecular_info | Corresponding_CDS | ZK265.4a | |||||||
| ZK265.4b | |||||||||
| ZK265.4c | |||||||||
| Corresponding_CDS_history | ZK265.4:wp139 | ||||||||
| Corresponding_transcript | ZK265.4a.1 | ||||||||
| ZK265.4b.1 | |||||||||
| ZK265.4c.1 | |||||||||
| Other_sequence | TS00310 | ||||||||
| FE911521.1 | |||||||||
| Acan_isotig07221 | |||||||||
| Oden_isotig22109 | |||||||||
| Dviv_isotig26408 | |||||||||
| FG355089.1 | |||||||||
| Associated_feature (11) | |||||||||
| Transcription_factor | WBTranscriptionFactor000341 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00059317 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038245 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004920 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12529 | ||||||||
| Expr15607 | |||||||||
| Expr1012028 | |||||||||
| Expr1030245 | |||||||||
| Expr1162746 | |||||||||
| Expr2009914 | |||||||||
| Expr2028154 | |||||||||
| Drives_construct | WBCnstr00021456 | ||||||||
| WBCnstr00037543 | |||||||||
| Construct_product | WBCnstr00037543 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (105) | |||||||||
| Interaction (53) | |||||||||
| Map_info | Map | I | Position | 2.70293 | Error | 0.00034 | |||
| Positive | Positive_clone | XXD4 | |||||||
| ZK265 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Mapping_data | Multi_point | 5076 | |||||||
| 4950 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00001190 | ||||||||
| WBPaper00004283 | |||||||||
| WBPaper00015440 | |||||||||
| WBPaper00021087 | |||||||||
| WBPaper00027309 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00048690 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060123 | |||||||||
| WBPaper00061738 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
