WormBase Tree Display for Gene: WBGene00000376
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| WBGene00000376 | Evidence | Person_evidence | WBPerson2661 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_IV | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | ccr-4 | |||||||
| Sequence_name | ZC518.3 | ||||||||
| Molecular_name (16) | |||||||||
| Other_name | CELE_ZC518.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ccr-4 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ccr | ||||||||
| Allele (150) | |||||||||
| Strain | WBStrain00003163 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Ortholog (44) | |||||||||
| Paralog | WBGene00011268 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020955 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable poly(A)-specific ribonuclease activity. Involved in nuclear-transcribed mRNA poly(A) tail shortening. Located in cytoplasm. Part of CCR4-NOT complex. Expressed in body wall musculature; germ line; neurons; somatic cell; and in male. Is an ortholog of human CNOT6 (CCR4-NOT transcription complex subunit 6) and CNOT6L (CCR4-NOT transcription complex subunit 6 like). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZC518.3a | |||||||
| ZC518.3b | |||||||||
| ZC518.3c | |||||||||
| ZC518.3d | |||||||||
| ZC518.3e | |||||||||
| Corresponding_CDS_history | ZC518.3a:wp84 | ||||||||
| ZC518.3b:wp84 | |||||||||
| Corresponding_transcript | ZC518.3a.1 | ||||||||
| ZC518.3b.1 | |||||||||
| ZC518.3c.1 | |||||||||
| ZC518.3c.2 | |||||||||
| ZC518.3d.1 | |||||||||
| ZC518.3e.1 | |||||||||
| Other_sequence (23) | |||||||||
| Associated_feature (27) | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Chronogram1993 | ||||||||
| Expr4479 | |||||||||
| Expr4480 | |||||||||
| Expr7174 | |||||||||
| Expr11132 | |||||||||
| Expr1010750 | |||||||||
| Expr1030202 | |||||||||
| Expr1162433 | |||||||||
| Expr2009768 | |||||||||
| Expr2028008 | |||||||||
| Drives_construct | WBCnstr00003639 | ||||||||
| WBCnstr00012046 | |||||||||
| WBCnstr00012048 | |||||||||
| WBCnstr00037587 | |||||||||
| Construct_product | WBCnstr00037587 | ||||||||
| Antibody | WBAntibody00002446 | ||||||||
| WBAntibody00002725 | |||||||||
| Microarray_results (36) | |||||||||
| Expression_cluster (140) | |||||||||
| Interaction (96) | |||||||||
| Map_info | Map | IV | Position | 5.86145 | Error | 0.002058 | |||
| Positive | Positive_clone | ZC518 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5302 | |||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
