WormBase Tree Display for Gene: WBGene00000292
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WBGene00000292 | SMap | S_parent | Sequence | D2024 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cap | ||||||
Allele (20) | |||||||
Legacy_information | [C.elegansII] NMK. Encodes homolog of actin capping protein, alpha subunit.Functional in yeast. [Waddle et al. 1993] | ||||||
Strain | WBStrain00028916 | ||||||
WBStrain00055410 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Contained_in_operon | CEOP4216 | ||||||
Ortholog (45) | |||||||
Structured_description | Concise_description | cap-1 encodes an F-actin capping protein alpha subunit that affects fertility; likely expressed in touch receptor neurons. | Paper_evidence | WBPaper00001839 | |||
WBPaper00004651 | |||||||
WBPaper00005356 | |||||||
Curator_confirmed | WBPerson48 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable actin filament binding activity. Predicted to be involved in actin cytoskeleton organization and barbed-end actin filament capping. Part of dynactin complex. Human ortholog(s) of this gene implicated in male infertility. Is an ortholog of human CAPZA1 (capping actin protein of muscle Z-line subunit alpha 1) and CAPZA2 (capping actin protein of muscle Z-line subunit alpha 2). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:12336 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24205) | ||
Molecular_info (4) | |||||||
Experimental_info | RNAi_result | WBRNAi00088764 | Inferred_automatically | RNAi_primary | |||
WBRNAi00008578 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00090793 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00007972 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043464 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00088657 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00091225 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085703 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00091224 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001944 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram1048 | ||||||
Expr5625 | |||||||
Expr16434 | |||||||
Expr1010907 | |||||||
Expr1030189 | |||||||
Expr1147458 | |||||||
Expr2009715 | |||||||
Expr2027954 | |||||||
Drives_construct | WBCnstr00002987 | ||||||
WBCnstr00009612 | |||||||
WBCnstr00037600 | |||||||
Construct_product | WBCnstr00037600 | ||||||
Antibody | WBAntibody00001781 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (102) | |||||||
Interaction (119) | |||||||
Map_info | Map | IV | Position | 3.30656 | Error | 0.001843 | |
Positive | Positive_clone | BW#ZA | |||||
D2024 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||
Reference (18) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |