WormBase Tree Display for Gene: WBGene00000274
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WBGene00000274 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | btf-1 | |||||||
Sequence_name | F15D4.1 | ||||||||
Molecular_name (3) | |||||||||
Other_name | CELE_F15D4.1 | Accession_evidence | NDB | BX284602 | |||||
Public_name | btf-1 | ||||||||
DB_info | Database | AceView | gene | 2N505 | |||||
WormQTL | gene | WBGene00000274 | |||||||
WormFlux | gene | WBGene00000274 | |||||||
NDB | locus_tag | CELE_F15D4.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000274|UniProtKB=G5EF07 | |||||||
family | PTHR10799 | ||||||||
NCBI | gene | 174965 | |||||||
RefSeq | protein | NM_064401.8 | |||||||
TREEFAM | TREEFAM_ID | TF352672 | |||||||
TrEMBL | UniProtAcc | G5EF07 | |||||||
UniProt_GCRP | UniProtAcc | G5EF07 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | btf | ||||||||
Allele (742) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (15) | |||||||||
Contained_in_operon | CEOP2601 | ||||||||
Ortholog (36) | |||||||||
Paralog (19) | |||||||||
Structured_description | Concise_description | btf-1 encodes a member of the TBP-associated family (TAF), with weak similarity to human TBP-associated factor 172. | Curator_confirmed | WBPerson48 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable ATP-dependent activity, acting on DNA and DNA binding activity. Predicted to be involved in chromatin remodeling. Predicted to be located in nucleus. Is an ortholog of human BTAF1 (B-TFIID TATA-box binding protein associated factor 1). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F15D4.1 | |||||||
Corresponding_CDS_history | F15D4.1:wp188 | ||||||||
Corresponding_transcript | F15D4.1.1 | ||||||||
Other_sequence (45) | |||||||||
Associated_feature | WBsf644798 | ||||||||
WBsf658348 | |||||||||
WBsf658349 | |||||||||
WBsf990356 | |||||||||
WBsf990357 | |||||||||
WBsf990358 | |||||||||
WBsf1013585 | |||||||||
WBsf1013586 | |||||||||
WBsf222344 | |||||||||
WBsf222345 | |||||||||
Experimental_info | RNAi_result | WBRNAi00044715 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00013365 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00081562 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00044714 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00075545 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00001042 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021979 | ||||||||
Expr1030178 | |||||||||
Expr1148688 | |||||||||
Expr2009679 | |||||||||
Expr2027918 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (93) | |||||||||
Interaction (129) | |||||||||
Map_info | Map | II | Position | 15.9344 | Error | 0.076486 | |||
Positive | Positive_clone | F15D4 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00065308 | |||||||||
Remark | Sequence connection from [Blackwell TK]. 02/06/12 krb. | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |