WormBase Tree Display for Gene: WBGene00000117
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WBGene00000117 | SMap | S_parent | Sequence | F42G9 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | alh | ||||||
Allele (84) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00067910 | ||||||
00067911 | |||||||
00067912 | |||||||
00106830 | |||||||
00106831 | |||||||
Contained_in_operon | CEOP3034 | ||||||
Ortholog (36) | |||||||
Paralog (11) | |||||||
Structured_description | Automated_description | Predicted to enable 4-trimethylammoniobutyraldehyde dehydrogenase activity and aminobutyraldehyde dehydrogenase activity. Is an ortholog of human ALDH9A1 (aldehyde dehydrogenase 9 family member A1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F42G9.5a | |||||
F42G9.5b | |||||||
Corresponding_transcript | F42G9.5a.1 | ||||||
F42G9.5b.1 | |||||||
F42G9.5b.2 | |||||||
Other_sequence (56) | |||||||
Associated_feature | WBsf976228 | ||||||
WBsf976233 | |||||||
WBsf976234 | |||||||
WBsf226128 | |||||||
Experimental_info | RNAi_result | WBRNAi00032159 | Inferred_automatically | RNAi_primary | |||
WBRNAi00006545 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006555 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047135 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032158 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047136 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014852 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001011 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1022730 | ||||||
Expr1030064 | |||||||
Expr1151003 | |||||||
Expr2009300 | |||||||
Expr2027537 | |||||||
Drives_construct | WBCnstr00037719 | ||||||
Construct_product | WBCnstr00037719 | ||||||
Microarray_results (30) | |||||||
Expression_cluster (113) | |||||||
Interaction | WBInteraction000122522 | ||||||
WBInteraction000122523 | |||||||
WBInteraction000122524 | |||||||
WBInteraction000270882 | |||||||
WBInteraction000329347 | |||||||
WBInteraction000359529 | |||||||
WBInteraction000368134 | |||||||
WBInteraction000383945 | |||||||
WBInteraction000570988 | |||||||
Map_info | Map | III | Position | -26.0689 | Error | 0.022717 | |
Positive | Positive_clone | F42G9 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00042257 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |