WormBase Tree Display for Gene: WBGene00000056
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| WBGene00000056 | SMap | S_parent | Sequence | F53E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | acr-17 | Person_evidence | WBPerson1430 | |||||
| Sequence_name | F53E10.2 | ||||||||
| Molecular_name (17) | |||||||||
| Other_name | CELE_F53E10.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | acr-17 | ||||||||
| DB_info | Database | AceView | gene | 5D91 | |||||
| WormQTL | gene | WBGene00000056 | |||||||
| WormFlux | gene | WBGene00000056 | |||||||
| NDB | locus_tag | CELE_F53E10.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000056|UniProtKB=Q6F6K3 | |||||||
| family | PTHR18945 | ||||||||
| NCBI | gene | 191603 | |||||||
| RefSeq | protein | NM_001316803.3 | |||||||
| NM_001028790.7 | |||||||||
| NR_133608.1 | |||||||||
| NM_001316802.4 | |||||||||
| NM_001316804.3 | |||||||||
| NR_133607.1 | |||||||||
| NR_133609.1 | |||||||||
| NR_133610.1 | |||||||||
| NR_133611.1 | |||||||||
| TrEMBL | UniProtAcc | A0A0M7RDU0 | |||||||
| A0A0M7RFG1 | |||||||||
| A0A0M7REC3 | |||||||||
| Q6F6K3 | |||||||||
| UniProt_GCRP | UniProtAcc | Q6F6K3 | |||||||
| RNAcentral | URSid | URS00008D29F9 | |||||||
| URS00008D703D | |||||||||
| URS00008D91B7 | |||||||||
| URS00008DD220 | |||||||||
| URS00008DECC1 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:19 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acr | ||||||||
| Allele (169) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (30) | |||||||||
| Paralog (100) | |||||||||
| Structured_description | Automated_description | Predicted to enable excitatory extracellular ligand-gated monoatomic ion channel activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to be involved in excitatory postsynaptic potential and monoatomic ion transmembrane transport. Predicted to be located in neuron projection and synapse. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53E10.2b | |||||||
| F53E10.2g | |||||||||
| F53E10.2h | |||||||||
| F53E10.2i | |||||||||
| Corresponding_CDS_history | F53E10.2:wp125 | ||||||||
| F53E10.2a:wp250 | |||||||||
| Corresponding_transcript | F53E10.2a | ||||||||
| F53E10.2c | |||||||||
| F53E10.2d | |||||||||
| F53E10.2e | |||||||||
| F53E10.2f | |||||||||
| F53E10.2b.1 | |||||||||
| F53E10.2g.1 | |||||||||
| F53E10.2h.1 | |||||||||
| F53E10.2i.1 | |||||||||
| Other_sequence (22) | |||||||||
| Associated_feature | WBsf999522 | ||||||||
| WBsf231523 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015507 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048121 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102747 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032692 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066372 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028446 | ||||||||
| Expr1151930 | |||||||||
| Expr2009184 | |||||||||
| Expr2027423 | |||||||||
| Drives_construct | WBCnstr00037765 | ||||||||
| Construct_product | WBCnstr00037765 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (90) | |||||||||
| Interaction | WBInteraction000323030 | ||||||||
| WBInteraction000343913 | |||||||||
| WBInteraction000378898 | |||||||||
| WBInteraction000448620 | |||||||||
| WBInteraction000449286 | |||||||||
| Map_info | Map | V | Position | -13.6639 | Error | 0.061958 | |||
| Positive | Positive_clone | F53E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005223 | ||||||||
| WBPaper00006324 | |||||||||
| WBPaper00006402 | |||||||||
| WBPaper00024530 | |||||||||
| WBPaper00025245 | |||||||||
| WBPaper00029012 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061589 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
