WormBase Tree Display for Gene: WBGene00227726
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WBGene00227726 | SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 11 | |||||||
Name | CGC_name | Bma-sax-3 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | Bm7465 | ||||||||
Molecular_name | Bm7465a | ||||||||
Bm7465a.1 | |||||||||
BM39771 | |||||||||
Bm7465b | |||||||||
BM47477 | |||||||||
Bm7465c | |||||||||
BM47499 | |||||||||
Bm7465b.1 | |||||||||
Bm7465c.1 | |||||||||
Other_name (11) | |||||||||
Public_name | Bma-sax-3 | ||||||||
Species | Brugia malayi | ||||||||
History | Version_change | 1 | 10 Dec 2012 14:43:25 | WBPerson4055 | Event | Created | |||
2 | 05 Jul 2013 11:43:21 | WBPerson4055 | Name_change | CGC_name | Bma-sax-3 | ||||
Other_name | Bm-sax-3 | ||||||||
3 | 09 Oct 2015 15:32:31 | WBPerson4055 | Event | Acquires_merge | WBGene00232846 | ||||
4 | 09 Oct 2015 15:32:31 | WBPerson4055 | Event | Acquires_merge | WBGene00221111 | ||||
5 | 09 Oct 2015 15:32:31 | WBPerson4055 | Event | Acquires_merge | WBGene00220940 | ||||
6 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
7 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Bma-sax-3 | ||||
8 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
9 | 04 Jun 2020 14:38:21 | WBPerson1983 | Name_change | CGC_name | Bma-sax-3 | ||||
10 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
11 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Bma-sax-3 | ||||
Acquires_merge | WBGene00220940 | ||||||||
WBGene00221111 | |||||||||
WBGene00232846 | |||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sax | ||||||||
RNASeq_FPKM (11) | |||||||||
Contained_in_operon | BMOP2728 | ||||||||
Ortholog (34) | |||||||||
Paralog (10) | |||||||||
Structured_description | Automated_description | Is affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. Is an ortholog of C. elegans sax-3. In C. elegans, sax-3 is involved in generation of neurons and regulation of sensory neuron axon guidance. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Bm7465a | |||||||
Bm7465b | |||||||||
Bm7465c | |||||||||
Corresponding_transcript | Bm7465a.1 | ||||||||
Bm7465b.1 | |||||||||
Bm7465c.1 | |||||||||
Other_sequence (35) | |||||||||
Experimental_info | Expression_cluster | WBPaper00045439:BM_Cluster_P5 | |||||||
WBPaper00049974:ivermectin_100nM_48h_upregulated | |||||||||
WBPaper00051007:downregulated_F120_vs_F30 | |||||||||
WBPaper00051007:downregulated_F120_vs_F42 | |||||||||
WBPaper00051007:downregulated_M120_vs_F120 | |||||||||
WBPaper00061765:L3_vs_Adult_Upregulated | |||||||||
Reference | WBPaper00045439 | ||||||||
WBPaper00048750 | |||||||||
Remark | [190208 pad] The CGC name Bma-sax-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[200204 pad] The CGC name Bma-sax-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
[210528 pad] The CGC name Bma-sax-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |