WormBase Tree Display for Gene: WBGene00021872
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WBGene00021872 | SMap | S_parent | Sequence | Y54G2A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-85 | Person_evidence | WBPerson261 | |||
WBPerson655 | |||||||
Sequence_name | Y54G2A.6 | ||||||
Molecular_name | Y54G2A.6a | ||||||
Y54G2A.6a.1 | |||||||
CE27494 | |||||||
Y54G2A.6b | |||||||
CE48649 | |||||||
Y54G2A.6b.1 | |||||||
Other_name | CELE_Y54G2A.6 | Accession_evidence | NDB | BX284604 | |||
Public_name | clec-85 | ||||||
DB_info | Database | AceView | gene | 4D619 | |||
WormQTL | gene | WBGene00021872 | |||||
WormFlux | gene | WBGene00021872 | |||||
NDB | locus_tag | CELE_Y54G2A.6 | |||||
Panther | gene | CAEEL|WormBase=WBGene00021872|UniProtKB=Q95XX2 | |||||
family | PTHR23062 | ||||||
NCBI | gene | 177068 | |||||
RefSeq | protein | NM_001380115.1 | |||||
NM_001383060.2 | |||||||
TrEMBL | UniProtAcc | Q95XX2 | |||||
U4PAM5 | |||||||
UniProt_GCRP | UniProtAcc | Q95XX2 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (146) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (20) | |||||||
Paralog (44) | |||||||
Structured_description | Automated_description | Expressed in intestine. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y54G2A.6a | |||||
Y54G2A.6b | |||||||
Corresponding_transcript | Y54G2A.6a.1 | ||||||
Y54G2A.6b.1 | |||||||
Other_sequence (2) | |||||||
Associated_feature | WBsf645853 | ||||||
WBsf995798 | |||||||
WBsf1016970 | |||||||
WBsf228065 | |||||||
Experimental_info | RNAi_result | WBRNAi00057471 | Inferred_automatically | RNAi_primary | |||
WBRNAi00089356 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089367 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1001 | ||||||
Expr1970 | |||||||
Expr4722 | |||||||
Expr1027165 | |||||||
Expr1039606 | |||||||
Expr1160917 | |||||||
Expr2010216 | |||||||
Expr2028457 | |||||||
Drives_construct | WBCnstr00012199 | ||||||
WBCnstr00015895 | |||||||
WBCnstr00018658 | |||||||
Construct_product | WBCnstr00012199 | ||||||
Microarray_results (25) | |||||||
Expression_cluster (321) | |||||||
Interaction | WBInteraction000517587 | ||||||
WBInteraction000517588 | |||||||
WBInteraction000517593 | |||||||
WBInteraction000517594 | |||||||
WBInteraction000525353 | |||||||
WBInteraction000525360 | |||||||
WBInteraction000549820 | |||||||
WBInteraction000585032 | |||||||
Map_info | Map | IV | Position | -6.72756 | Error | 0.000584 | |
Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00005382 | ||||||
WBPaper00029438 | |||||||
WBPaper00031686 | |||||||
WBPaper00031865 | |||||||
WBPaper00032196 | |||||||
WBPaper00037541 | |||||||
WBPaper00045045 | |||||||
WBPaper00055320 | |||||||
WBPaper00058665 | |||||||
WBPaper00059481 | |||||||
WBPaper00060200 | |||||||
WBPaper00065681 | |||||||
WBPaper00065850 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |