WormBase Tree Display for Gene: WBGene00015214
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| WBGene00015214 | SMap | S_parent | Sequence | B0496 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srtx-1 | Paper_evidence | WBPaper00032070 | |||||
| Person_evidence | WBPerson573 | ||||||||
| Sequence_name | B0496.5 | ||||||||
| Molecular_name | B0496.5 | ||||||||
| B0496.5.1 | |||||||||
| CE06717 | |||||||||
| Other_name | CELE_B0496.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | srtx-1 | ||||||||
| DB_info | Database | AceView | gene | 4I187 | |||||
| WormQTL | gene | WBGene00015214 | |||||||
| WormFlux | gene | WBGene00015214 | |||||||
| NDB | locus_tag | CELE_B0496.5 | |||||||
| NCBI | gene | 182008 | |||||||
| RefSeq | protein | NM_001380323.1 | |||||||
| TREEFAM | TREEFAM_ID | TF317604 | |||||||
| TrEMBL | UniProtAcc | Q17519 | |||||||
| UniProt_GCRP | UniProtAcc | Q17519 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 08 Aug 2008 10:29:27 | WBPerson2970 | Name_change | CGC_name | srtx-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srtx | ||||||||
| Allele (17) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00058328 | ||||||||
| 00058329 | |||||||||
| 00058330 | |||||||||
| 00058331 | |||||||||
| 00058332 | |||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Involved in thermosensory behavior. Located in neuron projection membrane and neuron projection terminus. Expressed in AFDL; AFDR; AWCL; and AWCR. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0496.5 | |||||||
| Corresponding_transcript | B0496.5.1 | ||||||||
| Other_sequence | Acan_isotig09262 | ||||||||
| Oden_isotig25790 | |||||||||
| Tcir_isotig24028 | |||||||||
| Associated_feature | WBsf996972 | ||||||||
| WBsf1017707 | |||||||||
| WBsf228529 | |||||||||
| WBsf228530 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00009818 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039123 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028178 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11098 | ||||||||
| Expr1018024 | |||||||||
| Expr1143278 | |||||||||
| Expr2016690 | |||||||||
| Expr2034873 | |||||||||
| Drives_construct | WBCnstr00018167 | ||||||||
| WBCnstr00021642 | |||||||||
| WBCnstr00022803 | |||||||||
| WBCnstr00022806 | |||||||||
| WBCnstr00028999 | |||||||||
| Construct_product | WBCnstr00018167 | ||||||||
| WBCnstr00028999 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (51) | |||||||||
| Interaction | WBInteraction000222289 | ||||||||
| WBInteraction000234991 | |||||||||
| WBInteraction000249866 | |||||||||
| WBInteraction000267062 | |||||||||
| WBInteraction000275456 | |||||||||
| WBInteraction000321199 | |||||||||
| WBInteraction000379538 | |||||||||
| WBInteraction000429609 | |||||||||
| WBInteraction000452750 | |||||||||
| WBInteraction000457500 | |||||||||
| Map_info | Map | IV | Position | 3.33478 | Error | 0.000105 | |||
| Positive | Positive_clone | B0496 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00030209 | ||||||||
| WBPaper00032070 | |||||||||
| WBPaper00032674 | |||||||||
| WBPaper00034223 | |||||||||
| WBPaper00036505 | |||||||||
| WBPaper00039410 | |||||||||
| WBPaper00043534 | |||||||||
| WBPaper00045913 | |||||||||
| WBPaper00061198 | |||||||||
| WBPaper00061932 | |||||||||
| WBPaper00065330 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
