WormBase Tree Display for Gene: WBGene00014234

WBGene00014234 SMap: S_parent: Sequence: ZK1128
  Identity: Version: 2
    Name: CGC_name: vps-29 Paper_evidence: WBPaper00027192
      Sequence_name: ZK1128.8
      Molecular_name: ZK1128.8a
        ZK1128.8a.1
        CE34140
        ZK1128.8b
        CE34141
        ZK1128.8b.1
      Other_name: CELE_ZK1128.8 Accession_evidence: NDB BX284603
      Public_name: vps-29
    DB_info: Database: AceView gene 3L202
        WormQTL gene WBGene00014234
        WormFlux gene WBGene00014234
        NDB locus_tag CELE_ZK1128.8
        Panther gene CAEEL|WormBase=WBGene00014234|UniProtKB=Q86D99
          family PTHR11124
        NCBI gene 176424
        RefSeq protein NM_001027816.4
            NM_001027817.4
        TREEFAM TREEFAM_ID TF300880
        TrEMBL UniProtAcc Q86D99
            Q9XVX5
        UniProt_GCRP UniProtAcc Q86D99
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 May 2006 09:18:16 WBPerson2970 Name_change: CGC_name: vps-29
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vps
    Allele (18)
    RNASeq_FPKM (74)
    GO_annotation: 00083153
      00083154
      00083155
      00083156
      00083157
      00083158
      00083159
      00083160
      00105906
    Contained_in_operon: CEOP3656
    Ortholog (33)
    Structured_description: Automated_description: Predicted to be involved in intracellular protein transport and retrograde transport, endosome to Golgi. Located in cytosol. Is an ortholog of human VPS29 (VPS29 retromer complex component). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK1128.8a
      ZK1128.8b
    Corresponding_CDS_history: ZK1128.8:wp100
    Corresponding_transcript: ZK1128.8a.1
      ZK1128.8b.1
    Other_sequence (48)
    Associated_feature: WBsf667368
      WBsf227413
      WBsf227414
  Experimental_info: RNAi_result: WBRNAi00059145 Inferred_automatically: RNAi_primary
      WBRNAi00038167 Inferred_automatically: RNAi_primary
      WBRNAi00097727 Inferred_automatically: RNAi_primary
      WBRNAi00097728 Inferred_automatically: RNAi_primary
      WBRNAi00002109 Inferred_automatically: RNAi_primary
      WBRNAi00021826 Inferred_automatically: RNAi_primary
      WBRNAi00097731 Inferred_automatically: RNAi_primary
      WBRNAi00006777 Inferred_automatically: RNAi_primary
      WBRNAi00062483 Inferred_automatically: RNAi_primary
      WBRNAi00099093 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr8902
      Expr1022488
      Expr1036383
      Expr1162569
      Expr2018019
      Expr2036156
    Drives_construct: WBCnstr00005934
      WBCnstr00013596
      WBCnstr00029206
    Construct_product: WBCnstr00005934
      WBCnstr00013596
      WBCnstr00029206
    Microarray_results (22)
    Expression_cluster (90)
    Interaction (88)
  Map_info: Map: III Position: 1.83284 Error: 0.001298
    Positive: Positive_clone: ZK1128 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027355
    WBPaper00031898
    WBPaper00035888
    WBPaper00036913
    WBPaper00038491
    WBPaper00040469
    WBPaper00042023
    WBPaper00045719
    WBPaper00053602
    WBPaper00055090
    WBPaper00055999
    WBPaper00061460
    WBPaper00063287
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene