WormBase Tree Display for Gene: WBGene00009122
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| WBGene00009122 | SMap | S_parent | Sequence | F25H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tct-1 | Person_evidence | WBPerson565 | |||||
| Sequence_name | F25H2.11 | ||||||||
| Molecular_name | F25H2.11 | ||||||||
| F25H2.11.1 | |||||||||
| CE09656 | |||||||||
| Other_name | CELE_F25H2.11 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | tct-1 | ||||||||
| DB_info | Database | AceView | gene | 1L147 | |||||
| WormQTL | gene | WBGene00009122 | |||||||
| WormFlux | gene | WBGene00009122 | |||||||
| NDB | locus_tag | CELE_F25H2.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009122|UniProtKB=Q93573 | |||||||
| family | PTHR11991 | ||||||||
| NCBI | gene | 172944 | |||||||
| RefSeq | protein | NM_001392937.1 | |||||||
| SwissProt | UniProtAcc | Q93573 | |||||||
| TREEFAM | TREEFAM_ID | TF300238 | |||||||
| UniProt_GCRP | UniProtAcc | Q93573 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Jul 2004 16:55:44 | WBPerson1971 | Name_change | CGC_name | tct-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tct | ||||||||
| Allele (20) | |||||||||
| Strain | WBStrain00053453 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00086209 | ||||||||
| 00086210 | |||||||||
| 00086211 | |||||||||
| 00086212 | |||||||||
| 00086213 | |||||||||
| Contained_in_operon | CEOP1624 | ||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Located in endoplasmic reticulum. Is an ortholog of human TPT1 (tumor protein, translationally-controlled 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info (3) | |||||||||
| Experimental_info | RNAi_result (20) | ||||||||
| Expr_pattern | Expr8606 | ||||||||
| Expr8607 | |||||||||
| Expr9546 | |||||||||
| Expr1015594 | |||||||||
| Expr1033973 | |||||||||
| Expr1149449 | |||||||||
| Expr2017364 | |||||||||
| Expr2035501 | |||||||||
| Drives_construct | WBCnstr00032447 | ||||||||
| Construct_product | WBCnstr00014111 | ||||||||
| WBCnstr00032447 | |||||||||
| Antibody | WBAntibody00001910 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction (104) | |||||||||
| Map_info | Map | I | Position | 5.05566 | Error | 9.3e-05 | |||
| Positive | Positive_clone | F25H2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028360 | ||||||||
| WBPaper00030262 | |||||||||
| WBPaper00032230 | |||||||||
| WBPaper00032999 | |||||||||
| WBPaper00033090 | |||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00050990 | |||||||||
| WBPaper00051103 | |||||||||
| WBPaper00052340 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| WBPaper00064898 | |||||||||
| WBPaper00064933 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
