WormBase Tree Display for Gene: WBGene00001829
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| WBGene00001829 | SMap | S_parent | Sequence | ZK1055 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | hcp-1 | Person_evidence | WBPerson537 | |||||
| Sequence_name | ZK1055.1 | ||||||||
| Molecular_name | ZK1055.1 | ||||||||
| ZK1055.1.1 | |||||||||
| CE18470 | |||||||||
| Other_name | CELE_ZK1055.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | hcp-1 | ||||||||
| DB_info | Database | AceView | gene | 5H79 | |||||
| WormQTL | gene | WBGene00001829 | |||||||
| WormFlux | gene | WBGene00001829 | |||||||
| NDB | locus_tag | CELE_ZK1055.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001829|UniProtKB=O76447 | |||||||
| family | PTHR34491 | ||||||||
| NCBI | gene | 179049 | |||||||
| RefSeq | protein | NM_072276.4 | |||||||
| TREEFAM | TREEFAM_ID | TF101133 | |||||||
| TrEMBL | UniProtAcc | O76447 | |||||||
| UniProt_GCRP | UniProtAcc | O76447 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hcp | ||||||||
| Allele (78) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00001830 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | hcp-1 encodes a homolog of the mammalian centromere protein-F (CENP-F) and is involved in mitotic chromosome segregation; hcp-1 functions in an ordered pathway consisting of two other CENP proteins encoded by hcp-3 and hcp-4 to control assembly of the kinetochore; hcp-1 localization to the kinetochore is dependent on hcp-3 and hcp-4. | Paper_evidence | WBPaper00003772 | |||||
| WBPaper00004735 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Involved in chromosome segregation; organelle organization; and protein localization. Located in kinetochore; nucleus; and spindle. Expressed in AB and Psub1. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1055.1 | |||||||
| Corresponding_transcript | ZK1055.1.1 | ||||||||
| Other_sequence (6) | |||||||||
| Associated_feature | WBsf661379 | ||||||||
| WBsf231892 | |||||||||
| WBsf231893 | |||||||||
| Experimental_info | RNAi_result (19) | ||||||||
| Expr_pattern | Expr1191 | ||||||||
| Expr3059 | |||||||||
| Expr1014439 | |||||||||
| Expr1031074 | |||||||||
| Expr1162505 | |||||||||
| Expr1200204 | |||||||||
| Expr2012377 | |||||||||
| Expr2030613 | |||||||||
| Drives_construct | WBCnstr00020451 | ||||||||
| WBCnstr00036662 | |||||||||
| Construct_product | WBCnstr00000663 | ||||||||
| WBCnstr00000893 | |||||||||
| WBCnstr00017306 | |||||||||
| WBCnstr00020451 | |||||||||
| WBCnstr00036662 | |||||||||
| Antibody | WBAntibody00000249 | ||||||||
| WBAntibody00002971 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (196) | |||||||||
| Interaction (72) | |||||||||
| Map_info | Map | V | Position | 0.10906 | Error | 0.000539 | |||
| Positive | Positive_clone | ZK1055 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003772 | ||||||||
| WBPaper00004303 | |||||||||
| WBPaper00004544 | |||||||||
| WBPaper00005322 | |||||||||
| WBPaper00005486 | |||||||||
| WBPaper00006142 | |||||||||
| WBPaper00010572 | |||||||||
| WBPaper00017715 | |||||||||
| WBPaper00018629 | |||||||||
| WBPaper00024319 | |||||||||
| WBPaper00024863 | |||||||||
| WBPaper00025100 | |||||||||
| WBPaper00025115 | |||||||||
| WBPaper00026074 | |||||||||
| WBPaper00027235 | |||||||||
| WBPaper00031320 | |||||||||
| WBPaper00031491 | |||||||||
| WBPaper00032153 | |||||||||
| WBPaper00032281 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00038685 | |||||||||
| WBPaper00041121 | |||||||||
| WBPaper00042793 | |||||||||
| WBPaper00046652 | |||||||||
| WBPaper00047908 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062330 | |||||||||
| WBPaper00063102 | |||||||||
| WBPaper00063423 | |||||||||
| WBPaper00065033 | |||||||||
| WBPaper00065685 | |||||||||
| Remark | Sequence connection from [Moore LL, Roth MB] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
