WormBase Tree Display for Gene: WBGene00001673
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| WBGene00001673 | SMap | S_parent | Sequence | C16A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gpa-11 | Person_evidence | WBPerson625 | |||||
| Sequence_name | C16A11.1 | ||||||||
| Molecular_name | C16A11.1a | ||||||||
| C16A11.1a.1 | |||||||||
| CE20515 | |||||||||
| C16A11.1b | |||||||||
| CE45827 | |||||||||
| C16A11.1a.2 | |||||||||
| C16A11.1b.1 | |||||||||
| Other_name | CELE_C16A11.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | gpa-11 | ||||||||
| DB_info | Database | AceView | gene | 2E545 | |||||
| WormQTL | gene | WBGene00001673 | |||||||
| WormFlux | gene | WBGene00001673 | |||||||
| NDB | locus_tag | CELE_C16A11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001673|UniProtKB=O76584 | |||||||
| family | PTHR10218 | ||||||||
| NCBI | gene | 173759 | |||||||
| RefSeq | protein | NM_001267160.2 | |||||||
| NM_001267159.1 | |||||||||
| SwissProt | UniProtAcc | O76584 | |||||||
| UniProt_GCRP | UniProtAcc | O76584 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gpa | ||||||||
| Allele (163) | |||||||||
| Strain | WBStrain00028933 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (64) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Concise_description | gpa-11 encodes a member of the G protein alpha subunit family of heterotrimeric GTPases; it is expressed in ADL and ASH amphid neurons. | Curator_confirmed (2) | ||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Involved in determination of adult lifespan and serotonin receptor signaling pathway. Predicted to be part of heterotrimeric G-protein complex. Expressed in SMD and chemosensory neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed (2) | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C16A11.1a | |||||||
| C16A11.1b | |||||||||
| Corresponding_transcript | C16A11.1a.1 | ||||||||
| C16A11.1a.2 | |||||||||
| C16A11.1b.1 | |||||||||
| Other_sequence | MI09042 | ||||||||
| Tcir_isotig14875 | |||||||||
| Tcol_isotig14696 | |||||||||
| FE910760.1 | |||||||||
| ASC32815_1 | |||||||||
| MCC04601_1 | |||||||||
| JI217112.1 | |||||||||
| Oden_isotig23660 | |||||||||
| JI211845.1 | |||||||||
| Associated_feature | WBsf987550 | ||||||||
| WBsf987551 | |||||||||
| WBsf987552 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00040641 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010808 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1311 | ||||||||
| Expr15371 | |||||||||
| Expr1014536 | |||||||||
| Expr1144695 | |||||||||
| Expr2012182 | |||||||||
| Expr2030418 | |||||||||
| Drives_construct | WBCnstr00001692 | ||||||||
| WBCnstr00001693 | |||||||||
| WBCnstr00006579 | |||||||||
| WBCnstr00006587 | |||||||||
| WBCnstr00006589 | |||||||||
| WBCnstr00008616 | |||||||||
| WBCnstr00008617 | |||||||||
| WBCnstr00017537 | |||||||||
| WBCnstr00036783 | |||||||||
| Construct_product | WBCnstr00001692 | ||||||||
| WBCnstr00001693 | |||||||||
| WBCnstr00010208 | |||||||||
| WBCnstr00036783 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (74) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | II | Position | -5.02732 | Error | 0.024647 | |||
| Positive | Positive_clone | C16A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4377 | |||||||
| 5349 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002880 | ||||||||
| WBPaper00003465 | |||||||||
| WBPaper00004366 | |||||||||
| WBPaper00006103 | |||||||||
| WBPaper00006194 | |||||||||
| WBPaper00022803 | |||||||||
| WBPaper00024504 | |||||||||
| WBPaper00024990 | |||||||||
| WBPaper00025416 | |||||||||
| WBPaper00028950 | |||||||||
| WBPaper00029015 | |||||||||
| WBPaper00029025 | |||||||||
| WBPaper00031303 | |||||||||
| WBPaper00031936 | |||||||||
| WBPaper00035128 | |||||||||
| WBPaper00040144 | |||||||||
| WBPaper00040879 | |||||||||
| WBPaper00043908 | |||||||||
| WBPaper00045584 | |||||||||
| WBPaper00056744 | |||||||||
| WBPaper00063631 | |||||||||
| WBPaper00064187 | |||||||||
| WBPaper00064634 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
