WormBase Tree Display for Gene: WBGene00022882
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WBGene00022882 | SMap | S_parent | Sequence | ZK1248 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | gtap-1 | Person_evidence | WBPerson634 | |||||
Sequence_name | ZK1248.13 | ||||||||
Molecular_name | ZK1248.13 | ||||||||
ZK1248.13.1 | |||||||||
CE41604 | |||||||||
Other_name | CELE_ZK1248.13 | Accession_evidence | NDB | BX284602 | |||||
Public_name | gtap-1 | ||||||||
DB_info | Database (9) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 10 Aug 2020 17:10:42 | WBPerson1983 | Name_change | CGC_name | gtap-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | gtap | ||||||||
Allele (55) | |||||||||
Strain | WBStrain00036112 | ||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP2224 | ||||||||
Ortholog (38) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABalaaaarl; ABalaaaarr; ABalppppaa; ABplpppaapa; and germ line based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including skn-1; glp-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by nine chemicals including manganese chloride; Zidovudine; and antimycin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZK1248.13 | |||||||
Corresponding_CDS_history | ZK1248.13:wp94 | ||||||||
ZK1248.13:wp182 | |||||||||
Corresponding_transcript | ZK1248.13.1 | ||||||||
Other_sequence | CR11758 | ||||||||
CBC12415_1 | |||||||||
CBC03666_1 | |||||||||
CJC03839_1 | |||||||||
CRC10531_1 | |||||||||
CJC05622_1 | |||||||||
Associated_feature | WBsf665559 | ||||||||
WBsf665560 | |||||||||
WBsf223105 | |||||||||
Experimental_info | RNAi_result | WBRNAi00062485 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00059183 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00038182 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00061958 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021845 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021844 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00082499 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00103649 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00082671 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021843 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007409 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00059184 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014074 | ||||||||
Expr1040122 | |||||||||
Expr1162602 | |||||||||
Expr2008738 | |||||||||
Expr2026973 | |||||||||
Drives_construct | WBCnstr00023897 | ||||||||
Construct_product | WBCnstr00023897 | ||||||||
Microarray_results (26) | |||||||||
Expression_cluster (106) | |||||||||
Interaction (24) | |||||||||
Map_info | Map | II | Position | -0.894749 | |||||
Positive | Positive_clone | ZK1248 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |