WormBase Tree Display for Gene: WBGene00004463
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WBGene00004463 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F49C12 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rpn | ||||||
Allele (24) | |||||||
Strain | WBStrain00002821 | ||||||
WBStrain00003270 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00068460 | ||||||
00068461 | |||||||
00068462 | |||||||
00068463 | |||||||
Contained_in_operon | CEOP4680 | ||||||
Ortholog (39) | |||||||
Paralog | WBGene00000813 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
Structured_description | Concise_description | rpn-7 is predicted to encode a non-ATPase subunit of the 19S regulatory complex of the proteasome that affects fertility and embryonic viability. | Paper_evidence | WBPaper00004651 | |||
WBPaper00004888 | |||||||
WBPaper00005599 | |||||||
WBPaper00005654 | |||||||
WBPaper00006395 | |||||||
Curator_confirmed | WBPerson48 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be part of proteasome regulatory particle. Expressed in tail. Is an ortholog of human PSMD6 (proteasome 26S subunit, non-ATPase 6). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F49C12.8 | |||||
Corresponding_transcript | F49C12.8.1 | ||||||
F49C12.8.2 | |||||||
Other_sequence (109) | |||||||
Associated_feature | WBsf655039 | ||||||
WBsf660503 | |||||||
WBsf228808 | |||||||
WBsf228809 | |||||||
Experimental_info | RNAi_result | WBRNAi00108802 | Inferred_automatically | RNAi_primary | |||
WBRNAi00032510 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085471 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00080719 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00080746 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001665 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00108857 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047796 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00080758 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00078779 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032519 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00078745 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00080690 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015283 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095629 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00109022 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00008823 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047808 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00111733 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00100232 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00100045 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00099650 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00025557 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022815 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00099852 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00108967 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00100980 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00108316 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00100419 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00066896 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00000183 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00112149 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00100606 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00008195 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00100793 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00078711 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00114583 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00108912 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00099246 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00099448 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram114 | ||||||
Chronogram1724 | |||||||
Expr6121 | |||||||
Expr6122 | |||||||
Expr12710 | |||||||
Expr1014849 | |||||||
Expr1032266 | |||||||
Expr1151643 | |||||||
Expr2015495 | |||||||
Expr2033730 | |||||||
Drives_construct | WBCnstr00003348 | ||||||
WBCnstr00004585 | |||||||
WBCnstr00035466 | |||||||
Construct_product | WBCnstr00035466 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (171) | |||||||
Interaction (200) | |||||||
Map_info | Map | IV | Position | 4.16054 | Error | 0.004059 | |
Positive | Positive_clone | F49C12 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference (18) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |