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WormBase Tree Display for Gene: WBGene00000498

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Name Class

WBGene00000498EvidenceCGC_data_submission
SMapS_parentSequenceY39H10A
IdentityVersion1
NameCGC_namechk-1Person_evidenceWBPerson1551
Sequence_nameY39H10A.7
Molecular_nameY39H10A.7a
Y39H10A.7a.1
CE26076
Y39H10A.7b
CE33867
Y39H10A.7b.1
Other_nameY39H10A.aCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_Y39H10A.7Accession_evidenceNDBBX284605
Public_namechk-1
DB_infoDatabase (14)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classchk
Allele (45)
StrainWBStrain00034800
WBStrain00034803
RNASeq_FPKM (74)
GO_annotation (23)
Contained_in_operonCEOP5515
Ortholog (57)
Paralog (30)
Structured_descriptionConcise_descriptionchk-1 encodes a CHK1-like serine threonin protein kinase that affects fertility.Paper_evidenceWBPaper00005039
Curator_confirmedWBPerson48
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable protein serine/threonine kinase activity. Involved in embryo development and mitotic DNA replication checkpoint signaling. Predicted to be located in nucleus. Expressed in germ line. Human ortholog(s) of this gene implicated in pancreatic cancer. Is an ortholog of human CHEK1 (checkpoint kinase 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:1793Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1925)
EFO:MONDO:0014769Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1925)
Molecular_infoCorresponding_CDSY39H10A.7a
Y39H10A.7b
Corresponding_transcriptY39H10A.7a.1
Y39H10A.7b.1
Other_sequence (15)
Associated_featureWBsf652545
WBsf668844
WBsf668845
WBsf668846
WBsf999681
WBsf999682
WBsf1019419
WBsf233520
WBsf233521
WBsf233522
Experimental_infoRNAi_resultWBRNAi00063322Inferred_automaticallyRNAi_primary
WBRNAi00097685Inferred_automaticallyRNAi_primary
WBRNAi00106239Inferred_automaticallyRNAi_primary
WBRNAi00063325Inferred_automaticallyRNAi_primary
WBRNAi00068045Inferred_automaticallyRNAi_primary
WBRNAi00106662Inferred_automaticallyRNAi_primary
WBRNAi00067270Inferred_automaticallyRNAi_primary
WBRNAi00103069Inferred_automaticallyRNAi_primary
WBRNAi00078179Inferred_automaticallyRNAi_primary
WBRNAi00106238Inferred_automaticallyRNAi_primary
WBRNAi00108251Inferred_automaticallyRNAi_primary
WBRNAi00098066Inferred_automaticallyRNAi_primary
WBRNAi00027520Inferred_automaticallyRNAi_primary
WBRNAi00068331Inferred_automaticallyRNAi_primary
WBRNAi00036960Inferred_automaticallyRNAi_primary
WBRNAi00067189Inferred_automaticallyRNAi_primary
WBRNAi00068334Inferred_automaticallyRNAi_primary
WBRNAi00067536Inferred_automaticallyRNAi_primary
WBRNAi00103080Inferred_automaticallyRNAi_primary
WBRNAi00067690Inferred_automaticallyRNAi_primary
WBRNAi00068165Inferred_automaticallyRNAi_primary
WBRNAi00087558Inferred_automaticallyRNAi_primary
WBRNAi00062864Inferred_automaticallyRNAi_primary
WBRNAi00067853Inferred_automaticallyRNAi_primary
WBRNAi00067835Inferred_automaticallyRNAi_primary
WBRNAi00068333Inferred_automaticallyRNAi_primary
WBRNAi00062863Inferred_automaticallyRNAi_primary
WBRNAi00068097Inferred_automaticallyRNAi_primary
WBRNAi00067908Inferred_automaticallyRNAi_primary
WBRNAi00026680Inferred_automaticallyRNAi_primary
WBRNAi00068335Inferred_automaticallyRNAi_primary
WBRNAi00097683Inferred_automaticallyRNAi_primary
WBRNAi00103081Inferred_automaticallyRNAi_primary
WBRNAi00076784Inferred_automaticallyRNAi_primary
WBRNAi00056297Inferred_automaticallyRNAi_primary
WBRNAi00097673Inferred_automaticallyRNAi_primary
WBRNAi00068835Inferred_automaticallyRNAi_primary
WBRNAi00063321Inferred_automaticallyRNAi_primary
WBRNAi00068006Inferred_automaticallyRNAi_primary
WBRNAi00078178Inferred_automaticallyRNAi_primary
WBRNAi00078180Inferred_automaticallyRNAi_primary
WBRNAi00062865Inferred_automaticallyRNAi_primary
WBRNAi00064498Inferred_automaticallyRNAi_primary
WBRNAi00097675Inferred_automaticallyRNAi_primary
WBRNAi00009316Inferred_automaticallyRNAi_primary
WBRNAi00086043Inferred_automaticallyRNAi_primary
WBRNAi00098035Inferred_automaticallyRNAi_primary
WBRNAi00068332Inferred_automaticallyRNAi_primary
WBRNAi00026681Inferred_automaticallyRNAi_primary
WBRNAi00098034Inferred_automaticallyRNAi_primary
WBRNAi00020429Inferred_automaticallyRNAi_primary
WBRNAi00078177Inferred_automaticallyRNAi_primary
WBRNAi00063324Inferred_automaticallyRNAi_primary
Expr_patternExpr3082
Expr4894
Expr9219
Expr1011525
Expr1030294
Expr1159784
Expr1200236
Expr2009991
Expr2028232
Drives_constructWBCnstr00037496
WBCnstr00038171
Construct_product (2)
Microarray_results (26)
Expression_cluster (145)
Interaction (138)
Map_infoMapVPosition-8.01265Error0.002467
PositivePositive_cloneY39H10AInferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5377
Pseudo_map_position
Reference (51)
RemarkSequence connection from [Boulton S, Vidal M]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene