WormBase Tree Display for Gene: WBGene00017207

WBGene00017207 SMap: S_parent: Sequence: F07E5
  Identity: Version: 3
    Name: CGC_name: fbxb-6 Person_evidence: WBPerson655
      Sequence_name: F07E5.1
      Molecular_name: F07E5.1
        F07E5.1.1
        CE53803
      Other_name: CELE_F07E5.1 Accession_evidence: NDB BX284602
      Public_name: fbxb-6
    DB_info: Database: AceView gene 2C357
        WormQTL gene WBGene00017207
        WormFlux gene WBGene00017207
        NDB locus_tag CELE_F07E5.1
        Panther gene CAEEL|WormBase=WBGene00017207|UniProtKB=P91225
          family PTHR22899
        NCBI gene 184141
        RefSeq protein NM_001377709.1
        TREEFAM TREEFAM_ID TF322871
        TrEMBL UniProtAcc P91225
        UniProt_GCRP UniProtAcc P91225
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-6
        3 21 Nov 2011 16:57:21 WBPerson1867 Event: Split_into: WBGene00219315
      Split_into: WBGene00219315
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (112)
    RNASeq_FPKM: WBls:0000002 (40)
      WBls:0000003 1.0514 From_analysis: RNASeq.elegans.WBls:0000003.control_median
        1e-10 From_analysis (2)
        3.17815 From_analysis: RNASeq.elegans.WBStrain00004346.WBls:0000003.Male.WBbt:0007833.SRP000401.SRX011569
        3.45695 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392693
        4.04858 From_analysis: RNASeq.elegans.WBStrain00004346.WBls:0000003.Male.WBbt:0007833.SRP000401.SRX037198
        4.56991 From_analysis: RNASeq.elegans.WBls:0000003.control_mean
        4.81127 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP058023.SRX1019174
        5.11979 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP058023.SRX1019175
        5.55085 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392695
        6.59182 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392694
      WBls:0000004 (35)
      WBls:0000006 0.0658804 From_analysis (2)
      WBls:0000007 0.0381462 From_analysis (2)
        1e-10 From_analysis (10)
      WBls:0000008 0.947685 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000008.Hermaphrodite.WBbt:0007833.SRP000401.SRX145480
        1e-10 From_analysis (2)
      WBls:0000010 (15)
      WBls:0000013 0.28322 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000013.Hermaphrodite.WBbt:0007833.SRP000401.SRX1022604
        10.1821 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000013.Hermaphrodite.WBbt:0007833.SRP000401.SRX099996
        1e-10 From_analysis (2)
        20.0675 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000013.Hermaphrodite.WBbt:0007833.SRP000401.SRX099987
        3.66973 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000013.Hermaphrodite.WBbt:0007833.SRP000401.SRX099986
        3.99098 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000013.Hermaphrodite.WBbt:0007833.SRP000401.SRX099997
        4.50878 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000013.Hermaphrodite.WBbt:0007833.SRP000401.SRX1022570
        5.43238 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000013.Hermaphrodite.WBbt:0007833.SRP000401.SRX103652
        6.38741 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000013.Hermaphrodite.WBbt:0007833.SRP000401.SRX099998
        7.08411 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000013.Hermaphrodite.WBbt:0007833.SRP000401.SRX1022571
      WBls:0000014 (14)
      WBls:0000015 (11)
      WBls:0000017 1e-10 From_analysis (10)
      WBls:0000020 0.106279 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000020.Hermaphrodite.WBbt:0007833.SRP000401.SRX1022597
        0.137506 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000020.Hermaphrodite.WBbt:0007833.SRP000401.SRX099973
        0.215788 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000020.Hermaphrodite.WBbt:0007833.SRP000401.SRX103670
        0.224657 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000020.Hermaphrodite.WBbt:0007833.SRP000401.SRX1022592
        0.281691 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000020.Hermaphrodite.WBbt:0007833.SRP000401.SRX099991
        0.338091 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000020.Hermaphrodite.WBbt:0007833.SRP000401.SRX1022609
        1e-10 From_analysis (10)
      WBls:0000021 (12)
      WBls:0000023 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000023.Hermaphrodite.WBbt:0007833.SRP015688.SRX185639
      WBls:0000024 (17)
      WBls:0000027 0.0532446 From_analysis: RNASeq.elegans.WBls:0000027.control_mean
        0.10796 From_analysis: RNASeq.elegans.WBStrain00040453.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP040623.SRX501865
        0.177069 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP000401.SRX151607
        0.302132 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP000401.SRX001872
        1e-10 From_analysis (13)
      WBls:0000031 1.22142 From_analysis: RNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103276
        1e-10 From_analysis (6)
      WBls:0000032 0.0643235 From_analysis (2)
        0.128647 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP058023.SRX1019178
        1e-10 From_analysis (5)
      WBls:0000035 1e-10 From_analysis (32)
      WBls:0000038 (24)
      WBls:0000041 (16)
      WBls:0000052 1e-10 From_analysis (10)
      WBls:0000063 (51)
      WBls:0000064 (14)
      WBls:0000065 (16)
      WBls:0000068 0.150082 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265363
        0.152656 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265365
        0.283501 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265362
        0.399419 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265360
        0.569025 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265361
        1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265364
      WBls:0000131 1e-10 From_analysis (9)
      WBls:0000141 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000141.Hermaphrodite.WBbt:0007833.SRP029448.SRX343161
      WBls:0000151 1e-10 From_analysis (14)
      WBls:0000171 1e-10 From_analysis (15)
      WBls:0000181 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000181.Hermaphrodite.WBbt:0007833.SRP029448.SRX343164
      WBls:0000191 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000191.Hermaphrodite.WBbt:0007833.SRP029448.SRX343165
      WBls:0000201 1e-10 From_analysis (12)
      WBls:0000221 1.09407 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004458.SRP029448.SRX343264
        1e-10 From_analysis (9)
      WBls:0000231 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000231.Hermaphrodite.WBbt:0007833.SRP029448.SRX343167
      WBls:0000251 0.574148 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0007833.SRP029448.SRX343168
        1e-10 From_analysis (9)
      WBls:0000261 0.83454 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000261.Hermaphrodite.WBbt:0007833.SRP029448.SRX343169
      WBls:0000281 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000281.Hermaphrodite.WBbt:0007833.SRP029448.SRX343170
      WBls:0000291 0.504862 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000291.Hermaphrodite.WBbt:0004015.SRP029448.SRX343294
        1e-10 From_analysis (12)
      WBls:0000301 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000301.Hermaphrodite.WBbt:0007833.SRP029448.SRX343172
      WBls:0000311 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000311.Hermaphrodite.WBbt:0007833.SRP029448.SRX343173
      WBls:0000321 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000321.Hermaphrodite.WBbt:0007833.SRP029448.SRX343174
      WBls:0000331 1e-10 From_analysis (2)
      WBls:0000351 1e-10 From_analysis (2)
      WBls:0000361 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000361.Hermaphrodite.WBbt:0007833.SRP029448.SRX343180
      WBls:0000381 1e-10 From_analysis (9)
      WBls:0000391 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000391.Hermaphrodite.WBbt:0007833.SRP029448.SRX343181
      WBls:0000401 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000401.Hermaphrodite.WBbt:0007833.SRP029448.SRX343182
      WBls:0000421 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000421.Hermaphrodite.WBbt:0007833.SRP029448.SRX343184
      WBls:0000431 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000431.Hermaphrodite.WBbt:0007833.SRP029448.SRX343185
      WBls:0000451 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000451.Hermaphrodite.WBbt:0007833.SRP029448.SRX343186
      WBls:0000461 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000461.Hermaphrodite.WBbt:0007833.SRP029448.SRX343187
      WBls:0000471 1e-10 From_analysis (7)
      WBls:0000491 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000491.Hermaphrodite.WBbt:0007833.SRP029448.SRX343191
      WBls:0000501 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000501.Hermaphrodite.WBbt:0007833.SRP029448.SRX343192
      WBls:0000511 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000511.Hermaphrodite.WBbt:0007833.SRP029448.SRX343194
      WBls:0000521 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000521.Hermaphrodite.WBbt:0007833.SRP029448.SRX343195
      WBls:0000531 1e-10 From_analysis (2)
      WBls:0000541 1e-10 From_analysis (2)
      WBls:0000551 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000551.Hermaphrodite.WBbt:0007833.SRP029448.SRX343200
      WBls:0000561 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000561.Hermaphrodite.WBbt:0007833.SRP029448.SRX343201
      WBls:0000581 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000581.Hermaphrodite.WBbt:0007833.SRP029448.SRX343202
      WBls:0000621 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000621.Hermaphrodite.WBbt:0007833.SRP029448.SRX343203
      WBls:0000674 0.196565 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265366
        0.248619 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265370
        0.262266 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265371
        0.374797 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265369
        0.410207 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265368
        0.417646 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265367
      WBls:0000676 0.265026 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265374
        0.341016 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265372
        0.424403 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265373
        0.496569 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265375
      WBls:0000694 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000694.Hermaphrodite.WBbt:0007833.SRP029448.SRX343205
      WBls:0000695 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000695.Hermaphrodite.WBbt:0007833.SRP029448.SRX343206
      WBls:0000696 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000696.Hermaphrodite.WBbt:0007833.SRP029448.SRX343207
      WBls:0000697 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000697.Hermaphrodite.WBbt:0007833.SRP029448.SRX343208
      WBls:0000699 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000699.Hermaphrodite.WBbt:0007833.SRP029448.SRX343210
      WBls:0000700 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000700.Hermaphrodite.WBbt:0007833.SRP029448.SRX343211
      WBls:0000701 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000701.Hermaphrodite.WBbt:0007833.SRP029448.SRX343212
      WBls:0000702 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000702.Hermaphrodite.WBbt:0007833.SRP029448.SRX343213
      WBls:0000703 1e-10 From_analysis: RNASeq.elegans.WBStrain00000001.WBls:0000703.Hermaphrodite.WBbt:0007833.SRP029448.SRX343214
    Ortholog: WBGene00087503 Caenorhabditis briggsae From_analysis: Inparanoid_8
      chrII_pilon.g3573 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (142)
    Structured_description: Automated_description: Enriched in XXX cell; germ line; and rectal epithelial cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by eight chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F07E5.1
    Corresponding_CDS_history: F07E5.1:wp229
      F07E5.1:wp274
    Corresponding_transcript: F07E5.1.1
    Associated_feature: WBsf657378
      WBsf657379
      WBsf657380
      WBsf986870
  Experimental_info: RNAi_result: WBRNAi00012829 Inferred_automatically: RNAi_primary
      WBRNAi00043907 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023265
      Expr1037392
      Expr1147880
      Expr2011671
      Expr2029910
    Microarray_results: SMD_F07E5.1
      180197_at
      Aff_F07E5.1
      GPL19516_CGZ0014696
      GPL21109_F07E5.1
      GPL8673_F07E5_1P00456
    Expression_cluster (85)
    Interaction (55)
  Map_info: Map: II Position: -13.896 Error: 0.004791
    Positive: Positive_clone: F07E5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene